ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3098_12

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(10115..11440)

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LK25_DINSH similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 451.0
  • Bit_score: 598
  • Evalue 4.70e-168
  • rbh
TRAP dicarboxylate transporter similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 451.0
  • Bit_score: 598
  • Evalue 1.50e-168
  • rbh
TRAP dicarboxylate transporter {ECO:0000313|EMBL:ABV93224.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 451.0
  • Bit_score: 598
  • Evalue 6.50e-168

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dinoroseobacter shibae → Dinoroseobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGAGCGGCGCGGCTCTCGCAGCGACAGCCTTCGCCATAGCGCTCGGCGCCATGTTCCTCAGGATGCCGATCGGCGCCGCGATGCTGCTGACCGGCGTCTGCGGCACCTGGATCATCACCGGCTCGATGGTGCCGGCGCTCTCCGCGCTCAAGACACTGACGGACGACACGTTCTCGAGCCACTCGCTCTCGATCATCCCGCTCTTCCTGCTCATGGGGCAGTTCGCGACGCGCTCGGGGCTGTCGGAGTCGCTCTTCCGCGCAGCGGCAGATTGGGTCGGCCATCGCCGCGGCGGGCTTGCCATGGCGGCGGTCGGTGCCTGTGCGGGCTTCGGCTCCGTGTGCGGCTCCTCGCTGGCGACCGCGGCGACCATGGGGCAGGTGGCCCTGCCGGCGCTGCGCAAGAGTGGTTATTCCGGTGCGTTGTCTACCGGCGTGCTCGCAGCGGGCGGTACGCTCGGCATTCTCATTCCACCCTCGATCGTCCTCGTCGTCTATGCGGTGCTGACCGAGCAGAACATCGTGAAGATGTTTATGGCCGCACTGATCCCGGGCATTCTTGCGGCGATCGGCTACGTCATCACGGTGTCGATCTATATCCGCGTCGTTCCGGGATCGGCAGGGGAGCTCGCGCCGCGCAAATCCATGGCCGAGCGCTGGCAGTCATTGCAGGGGGTGTGGCCGGTCGCGCTGATCTTCGCGCTGGTGATCGGCGGCATCTATGTGGGCTGGTTCACGCCGACCGAGGGGGCCGCGGTCGGTGCCGTCGCGACGGGGCTCTATGCGCTCGGCACGGGGCGCCTCGACTGGTCGACATTCTCGGCCTGCGTGCTCGAGACGGCGGTCGCCTCGGCGATGATCTATTTCATCATTCTCGGTGCGGCGACCTTCAATACCTTCCTCGCCCTGACGCAGCTTCCGCAGGCCGCGGCCGACTGGGCAAAAGTGTCGGGCCTCTCCCCGCTCGCGATCCTGACCCTGATCCTGATCGTCTACATCATCCTCGGCTGCGTCATGGACTCGCTCTCCATGATGCTGCTGACGATCCCCGTGTTCTTCCCCGTGGTGATGGCTCTGGACTATGGCCTCAATCCCGAGGAGACGGCCATCTGGTTCGGCATTCTCGTGCTGATCGTCGTCGAGGTCGGGCTCATCACCCCACCCGTGGGGCTCAACCTCTTCATCATCAATTCGATGGCGGCGGGTGTGCGGCTCAGCGAGACCTACAGGGGCGCGCTCCCCTTCGTCATCAGCGACATGGTCCGCACGACCATCCTCGTGATGTTCCCTGTCATCACCTTGTGGCTCGTCCGCGTCGGCTTCTGA
PROTEIN sequence
Length: 442
MSGAALAATAFAIALGAMFLRMPIGAAMLLTGVCGTWIITGSMVPALSALKTLTDDTFSSHSLSIIPLFLLMGQFATRSGLSESLFRAAADWVGHRRGGLAMAAVGACAGFGSVCGSSLATAATMGQVALPALRKSGYSGALSTGVLAAGGTLGILIPPSIVLVVYAVLTEQNIVKMFMAALIPGILAAIGYVITVSIYIRVVPGSAGELAPRKSMAERWQSLQGVWPVALIFALVIGGIYVGWFTPTEGAAVGAVATGLYALGTGRLDWSTFSACVLETAVASAMIYFIILGAATFNTFLALTQLPQAAADWAKVSGLSPLAILTLILIVYIILGCVMDSLSMMLLTIPVFFPVVMALDYGLNPEETAIWFGILVLIVVEVGLITPPVGLNLFIINSMAAGVRLSETYRGALPFVISDMVRTTILVMFPVITLWLVRVGF*