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SCNpilot_expt_1000_bf_scaffold_4209_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(1069..2667)

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036B634D similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 531.0
  • Bit_score: 598
  • Evalue 5.60e-168
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76115.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 531.0
  • Bit_score: 626
  • Evalue 2.70e-176
ABC transporter peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 525.0
  • Bit_score: 592
  • Evalue 1.70e-166

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGACCAACCGCGTGACCCGCGGTGCTGCTGCATTTGTCATTGCAGCGTGCGCGCTTGCGCCATCTGCCGCCTTTGCTCAGAAGTCCGGCGGCATCCTGAGAACGTACAACAGCTCGAACCCGCCGAGTGCCTCGATCATCGAGGAGGCGACGATCGCGACGGCCTTCGCCTTCGCGCCGATCTTCAACAACCTCGTCATTTTCGACCAGGCCGAGCCGATCAACAAACCCGAGGTCATCCGCCCGGAGCTGGCTGAGAGCTGGGCCTGGGACGCGACCAACACGCGCCTCACCATGAAGCTGCGCCAGGGCGTGAAGTGGCATGATGGCAAGCCATTCACCTCGGCGGACGTCAAGTGCACCTGGGACCGCATTCTCGGCAAGGACCCGGACGCGTTCCGCAAGAATCCGCGCAAGCTCTGGTGGACGAACATCAAGGAGATCGAGATCAAGGGCGATCACGAGTTCACCTTCGTGCTCGAGCGCCCGCAAGCCTCGTTCCTCAGCCTCCTCGCCTCGAATATGTCGCCGGTCTACTCGTGCCACGCGCCGACGCGCGACATGCGCACGAAGCCGATCGGCACGGGCCCCTTCAAGTTCGTTTCCTTCGAGGCGAACAACGTCATCCGCATGGAGCGCAACAAGGACTACTGGCGCGAGGGTCGGCCCTACGTCGATGGCATCGAGGTCCGCATCATCGGCAACCGCTCGACGCGCCTCCTCGCCTTCTCCGCCAATGAGTTCGACATCACGTTCGTCGCCGACGTGACGGCGCCGCTGGTCGGCGATGTGAAAGCCCGCTCGCCACAGGCAACCTGTGAGCTCGTGCCCTCGGGCGTCAGCACGAACCTGCTCGTCAATCGCGAGAAGCCGCCCTTCGACAATCCGAAGCTGCGCGAGGCCATGACCCTGGCGCTCGATCGCGATGCCATGGTCAAGATCGTGACGGCGGGCAAGGCCAGCATCTCGGGCGCCATGATGGCCGAGCCCGAGGGCAACTGGGGTATGCCGAAGGCAATGCTCGAGCAGTTCGCCGAGTATGCCGGCACGCCCGCCGAGCGCCGCGAGAAGGCGCGCAAGATCATGCAGGAGCTCGGCTACGGCCCGAGCAACAAGCTCAAGATCAAGGTCGGTACGCGCGACTTCCAGGCCTTCAAGGACCCGGCGGTGCTGCTGGTCGATCAGCTCAACCAGATCTACTTCGACGCCGAGCTGGAGATCATCGAGTCGACGCTCTACTACGGCCGCGTGACGCGCGGCGACTACGCCGTGGTGCTGAACCTCACCGGCTCGGGCGTCGACGAGCCGGATGTGACCATGGTCGAAAGCTACTCGTGCGGCTCGGAGCGCAACTACACGAAGTACTGCAACAAGGATGTCGATCGCCTGATCGACGCGCAGTCGCGTGAGATCGATGTCGCCAAGCGCAAGCAGCTCGTCTGGCAGATCGAGAAGATCCTGATCGACGACCAGGCGCGCCCGATCATCTATCACGGCTTCGCCGGCACCTGCTGGCACCCGCACGTGAAGGGCCACGTGCTGCACCAGAACTCGATCTACAACAACTGGCGCTTCGAGAACGTCTGGCTCGACAAGTAG
PROTEIN sequence
Length: 533
MTNRVTRGAAAFVIAACALAPSAAFAQKSGGILRTYNSSNPPSASIIEEATIATAFAFAPIFNNLVIFDQAEPINKPEVIRPELAESWAWDATNTRLTMKLRQGVKWHDGKPFTSADVKCTWDRILGKDPDAFRKNPRKLWWTNIKEIEIKGDHEFTFVLERPQASFLSLLASNMSPVYSCHAPTRDMRTKPIGTGPFKFVSFEANNVIRMERNKDYWREGRPYVDGIEVRIIGNRSTRLLAFSANEFDITFVADVTAPLVGDVKARSPQATCELVPSGVSTNLLVNREKPPFDNPKLREAMTLALDRDAMVKIVTAGKASISGAMMAEPEGNWGMPKAMLEQFAEYAGTPAERREKARKIMQELGYGPSNKLKIKVGTRDFQAFKDPAVLLVDQLNQIYFDAELEIIESTLYYGRVTRGDYAVVLNLTGSGVDEPDVTMVESYSCGSERNYTKYCNKDVDRLIDAQSREIDVAKRKQLVWQIEKILIDDQARPIIYHGFAGTCWHPHVKGHVLHQNSIYNNWRFENVWLDK*