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SCNpilot_expt_1000_bf_scaffold_3376_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(341..2854)

Top 3 Functional Annotations

Value Algorithm Source
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 812.0
  • Bit_score: 1393
  • Evalue 0.0
Formate dehydrogenase, alpha subunit n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ02_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 812.0
  • Bit_score: 1393
  • Evalue 0.0
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ADH91121.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 812.0
  • Bit_score: 1393
  • Evalue 0.0

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2514
ATGACGCTCGTCAACGAGATCGATTACGGCACGCCGGCCTCCAAGTCCGAGAAGATGGTCACGCTGACCATCGACGGCGTCGAGGTGACGGTGCCCGAGGGCACGTCGATCATGCGCGCGGCCATGGAGCTCGGCACGCAGATCCCGAAGCTCTGCGCGACCGACAGCATCGAGGCCTTCGGCTCCTGCCGCCTCTGCCTCGTCGAGATCGAAGGCCGACCCGGCACGCCCGCTTCCTGTACGACGCCGGCCATGAACGGGCTCGTCGTGCACACGCAGACATCGCGCCTGAAGCAGCTCCGCCGCGGCGTGATGGAGCTCTACATCTCGGACCACCCGCTGGATTGCCTCACCTGCGCGGCGAACGGCGACTGCGAGCTACAGGACATGGCCGGCGCCGTGGGCCTGCGCGATGTGCGCTACGGCTATGACGGGGCCAACCACGTCTTTGCCAAGGCCAAGGACGGCGCGGCGAACGACGCCTGGATGCCGAAGGACGAGAGCAACCCCTATTTCACGTACGATCCCTCGAAGTGCATTGTCTGCAATCGCTGCGTGCGCGCCTGCGAGGAAGTGCAGGGCACTTTTGCGTTGACCATTGCGGGGCGTGGCTTCGAAAGCCGTGTCGCGGCCGGCACGTCCGAGAATTTCCTCGACAGTGAATGCGTCTCGTGCGGTGCCTGCGTGCAGGCCTGCCCCACGGCGACGCTGAGCGAGAAGTCTCTCATCGACATCGGCCAGCCTGAGCATTCCGTCGTCACCACGTGCGCTTATTGCGGTGTCGGCTGCTCCTTCAAGGCCGAGATGCGCGGCGAGGAAGTCGTGCGCATGGTGCCCTACAAGGACGGCAAGGCGAACCGCGGACACTCTTGCGTCAAGGGTCGCTTTGCCTGGGGCTACACCACGCACAAGGAGCGCATCCTGAAGCCCATGGTGCGCGACAAGATCACCGATCCTTGGCGCGAGACGACGTGGGAAGAGGCGATCGACCGCGTCGTCTCCGAGTTCAAGCGCATTCAGTTCCAGTACGGCCGCGACGCCGTCGGCGGCATCACGTCCTCGCGTTGCACGAACGAGGAGACGTTCCTCGTCCAGAAGCTGATCCGCGCCGGCTTTGGCGTGAACAACGTCGATACGTGCGCGCGCGTTTGCCACTCGCCGACGGGCTATGGACTGAGGACGGCTTTCGGCACGTCCGCCGGTACGCAGGACTTCGATTCCGTCGAGGACTCCGATGTCATGCTGGTCATCGGCGCGAACCCGACGGACGCCCACCCCGTGTTCGCGAGCCGCATGAAGAAGCGCCTGCGGGCGGGCGCCAAGCTGATCGTCGTCGATCCGCGCCGTATCGATCTCGTGCGCTCGGTCCATATCGAAGCGGCGCATCATCTGCCGCTGCTGCCCGGCACGAACGTCGCCGTCCTGACGGCCATGGCACACGTCATCGTCACCGAAGGTCTCGTGAACGAGAAGTTCGTTCGCGAGCGTTGCGAGATGGATGACTTCCAGGAATGGGCGGCCTTCGTCGCCGAGGAGCGCCATTCGCCGGAGGCGGTTGCCAAGTTCACGGGCGTCGATCCGGCGGAGCTGCGCGCCGCGGCCCGCCTCTATGCAACGGGCGGCAATGCCGCGATCTACTACGGTCTCGGCGTCACGGAGCACAGCCAGGGATCGACGACCGTCATGGCGATTGCGAACCTCGCCATGGTGACGGGCAATCTCGGCCGCCGCGGCGTCGGCGTGAACCCCCTGCGCGGTCAGAACAACGTGCAGGGCTCATGCGATATGGGCTCCTTCCCGCACGAGTTCTCGGGCTATCGCCACGTCAGCGATGATGGCGTCCGCGCCACGTTCGAAGCCATGTGGGGCACGAAGCTCAATCCGGAGCCGGGCCTGCGCATTCCGAACATGCTGGATGCGGCCGTCGAAGGCACGTTCCGGGGCCTCTATATCCAGGGTGAGGACATCCTGCAGTCCGATCCGGATACGACGCACGTGTCCGCCGGGCTCGCGGCGATGGAATGCGTGGTCGTACAGGATCTCTTCCTCAACGAGACGGCCAACTACGCGCATGTCTTCCTGCCCGGCTCGACCTTCCTCGAGAAGGATGGAACCTTCACCAACGCCGAGCGGCGCATCCAGCTCGTTCGGCGCGTGATGACGCCGCGCAACGGCTATGCCGATTGGGAGATCACGCAGCTCCTCGCGCACGGCTTCGGGCTCGACTGGAACTACACCCATCCGAGCCAGGTCATGGACGAGATCGCGGCGCTGACGCCGACCTTCAAGAACGTGAGCTTCAAGAAGATCGAGGAAATGGGCTCGGTGCAGTGGCCCTGCAATGACGCCAATCCCGAAGGCTCGCCCATCATGCACGCGACGACCTTCGCGCGCGGCAAGGGCAAGTTCATGCTCACCGAGTACGTGCCGACGGANNNNNNNNNNNCGCATTCTCTCGCAGTACAATGTCGGCGCCCAGACGCGGCGTACCGAAAACGTCATGTGGCACGATGA
PROTEIN sequence
Length: 838
MTLVNEIDYGTPASKSEKMVTLTIDGVEVTVPEGTSIMRAAMELGTQIPKLCATDSIEAFGSCRLCLVEIEGRPGTPASCTTPAMNGLVVHTQTSRLKQLRRGVMELYISDHPLDCLTCAANGDCELQDMAGAVGLRDVRYGYDGANHVFAKAKDGAANDAWMPKDESNPYFTYDPSKCIVCNRCVRACEEVQGTFALTIAGRGFESRVAAGTSENFLDSECVSCGACVQACPTATLSEKSLIDIGQPEHSVVTTCAYCGVGCSFKAEMRGEEVVRMVPYKDGKANRGHSCVKGRFAWGYTTHKERILKPMVRDKITDPWRETTWEEAIDRVVSEFKRIQFQYGRDAVGGITSSRCTNEETFLVQKLIRAGFGVNNVDTCARVCHSPTGYGLRTAFGTSAGTQDFDSVEDSDVMLVIGANPTDAHPVFASRMKKRLRAGAKLIVVDPRRIDLVRSVHIEAAHHLPLLPGTNVAVLTAMAHVIVTEGLVNEKFVRERCEMDDFQEWAAFVAEERHSPEAVAKFTGVDPAELRAAARLYATGGNAAIYYGLGVTEHSQGSTTVMAIANLAMVTGNLGRRGVGVNPLRGQNNVQGSCDMGSFPHEFSGYRHVSDDGVRATFEAMWGTKLNPEPGLRIPNMLDAAVEGTFRGLYIQGEDILQSDPDTTHVSAGLAAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRIQLVRRVMTPRNGYADWEITQLLAHGFGLDWNYTHPSQVMDEIAALTPTFKNVSFKKIEEMGSVQWPCNDANPEGSPIMHATTFARGKGKFMLTEYVPTXXXXXHSLAVQCRRPDAAYRKRHVAR*