ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6082_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 1..504

Top 3 Functional Annotations

Value Algorithm Source
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 161.0
  • Bit_score: 186
  • Evalue 5.10e-45
3-hydroxy-3-methylglutaryl-CoA lyase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003722AFC similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 162.0
  • Bit_score: 190
  • Evalue 1.50e-45
3-hydroxy-3-methylglutaryl-CoA lyase {ECO:0000313|EMBL:KJB96518.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 165.0
  • Bit_score: 189
  • Evalue 4.50e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
TTCGGCTGCACGATCGAAGGCAGCGTCGATCCGAAGCGCGTGGTGAGCTTCGCGGAGCGCTATCTCGCGCTCGGCGCCGACGAGATCACGCTCGCCGATACGGTCGGCTATGCGGGGCCAGGCGCAGTGAAGAGCCTCTTCGATGAGGTCGTGAAGCTCGCCGCGGGCAAGCCCGTGTACTGCCACTTCCACGACACGCGCGGTCTCGGCCTCGCCAATGCCTATGCGGCGCTCGAAGCGGGCGTGACCGGCTTCGATGCCTCGACCGGCGGCCTCGGTGGCTGCCCGTTCGCGCCCGGCGCCTCCGGCAACATCGTGATGGAAGATCTCGTCTTCATGCTCGAGAAGCAGGGGATCAGGACGGGCGTCGATCTCGAGCTCTATCGCGAGGCGCGCCGCATTGCCGAGACGGCGCTTCCCGACGAGAGCTTCTACGGCACGATTTTCCGGGCCGGATTGCCGAAAGGCTTCAATCCGCCGACGCGGCGCATGGCTGCTGAATAA
PROTEIN sequence
Length: 168
FGCTIEGSVDPKRVVSFAERYLALGADEITLADTVGYAGPGAVKSLFDEVVKLAAGKPVYCHFHDTRGLGLANAYAALEAGVTGFDASTGGLGGCPFAPGASGNIVMEDLVFMLEKQGIRTGVDLELYREARRIAETALPDESFYGTIFRAGLPKGFNPPTRRMAAE*