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SCNpilot_expt_1000_bf_scaffold_5788_6

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(4313..5596)

Top 3 Functional Annotations

Value Algorithm Source
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Pseudomonas sp. GM49 RepID=J2S835_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 393.0
  • Bit_score: 413
  • Evalue 2.10e-112
  • rbh
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 423.0
  • Bit_score: 361
  • Evalue 3.80e-97
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 394.0
  • Bit_score: 490
  • Evalue 1.90e-135

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1284
TTGCCCACGATAATGGGCGGTCTAGATTTCCTCNNNNNNNNNNNNNNNNNNGGTGAGGAACTCATGCTCGATTCTGCTGCAACGTCTGGGCCTCAGAGAGCGGCACGCGCGGGTATTCGCGTCATCGAGCTCGCAAATTTCGTTTCAGGCCCGTTCATCGGCATGCAGCTCGCCGACTATGGCGCGGACGTCATCAAGATCGAGCATCCGACCCGCGGCGATGGCATCCGCACTTGGGGCAACCGCAAGAACGGTATCGGGCTCTATCACAAGGTCCTCAACCGCAACAAAAAGAGCGTGTCGGCCGACCTCGGCACGCCGCTCGGCGTGGAGATCGCGCGTCGCCTCGTGGCGCGCGCCGACGTCGTCATCGAGAACTTCAGGCCGGGCACGCTGGAGGAATGGGGGCTCGGCTATGACGTGCTGTCGGCCGTCAATCCGGGGCTCGTGCTCGTGCGGGTTTCCGGATTCGGCCAGACAGGTCCTTATCGCGAGCGTTCCGGCTTCGGCTCTTTGGCCGAGGCCATGACGGGCTTTGCCTACACGAACGGTTTTGCCGATCGCCCACCACTGCTGCCGAGCTTTGCCATGGCGGACTCGACGACGGGGCTCGCCGGTGCCTTTCTGACACTCGCGGCCCTCGAAGCGCGTCGCAACAACGGCGGCAAGGGCCAGATCGTCGACTTGCCGATCTACGAGCCGATGCTGTCGCTCATGGGGGCGCAGGTCGTAGACTACGATCAGCTCGGCATTGTTCAGCAGCGCCAGGGCAGTCGGTTGCCGCTCGTTTCACCGCGCAATACATTTCGGACGCGCGACGGTGGCTGGATTGCGCTCTCAGGCGGCGCGCACGCGGTCTTCCAGAGATTGTGCACGGCGCTGAATGTTCCCGAGCTCGCCGACGATCCGCGCTTCAGCGACAATCAGAAGCGGCTCGAGAATGCCGATGCCATCGAGCAGGCGCTGCAGGATGCCATTGGCAAATTCACGCTGAAGGAAGTCGCGGCGCGACTGCGCGAGCATGATGCCCCTGGTGCCCCCGTCTACAGCGTCGCCGACATGTTCGAGGATCCGCACCTTCTGGCGCGCGAGAACATCACCACCGTCGCAGACGAAGAGCTTCAGGACGGCATTCAGATGCCGAATGTCATCGGCAAATTCTCGGAGACACCGGGCATCGTGCGGCACGCCGCGCAGCGGCTCGGCGCGAGCAATCTGGAAGTGCTCGTCAAAGAGCTTGGCTTCGATGCGGACGAGCTGACGGCGGCCGGCATCAAACTTTGA
PROTEIN sequence
Length: 428
LPTIMGGLDFLXXXXXXGEELMLDSAATSGPQRAARAGIRVIELANFVSGPFIGMQLADYGADVIKIEHPTRGDGIRTWGNRKNGIGLYHKVLNRNKKSVSADLGTPLGVEIARRLVARADVVIENFRPGTLEEWGLGYDVLSAVNPGLVLVRVSGFGQTGPYRERSGFGSLAEAMTGFAYTNGFADRPPLLPSFAMADSTTGLAGAFLTLAALEARRNNGGKGQIVDLPIYEPMLSLMGAQVVDYDQLGIVQQRQGSRLPLVSPRNTFRTRDGGWIALSGGAHAVFQRLCTALNVPELADDPRFSDNQKRLENADAIEQALQDAIGKFTLKEVAARLREHDAPGAPVYSVADMFEDPHLLARENITTVADEELQDGIQMPNVIGKFSETPGIVRHAAQRLGASNLEVLVKELGFDADELTAAGIKL*