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SCNpilot_expt_1000_bf_scaffold_5623_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 1..159

Top 3 Functional Annotations

Value Algorithm Source
Probable amino acid-binding protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GL83_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 52.0
  • Bit_score: 76
  • Evalue 7.40e-12
cationic amino acid ABC transporter periplasmic binding protein; K09969 general L-amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 52.0
  • Bit_score: 76
  • Evalue 4.00e-12
Probable amino acid-binding protein {ECO:0000313|EMBL:EDM84764.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 52.0
  • Bit_score: 76
  • Evalue 1.00e-11

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Taxonomy

Limnobacter sp. MED105 → Limnobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 159
CTGCCGCGCGACTGGGTCTACCAGATCCTGAAATCGCTCGGGAACTATGGCGAGTTCTTCGAGCGCAATCTCGGCCAGCGTTCCGCGCTAAAGCTCGAGCGGCGCGCCAACGAGCTGTGGATCAAGGGCGGCCTCATGGTCGCGCCGCACCTGCGCTGA
PROTEIN sequence
Length: 53
LPRDWVYQILKSLGNYGEFFERNLGQRSALKLERRANELWIKGGLMVAPHLR*