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SCNpilot_expt_1000_bf_scaffold_5395_11

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 7193..7825

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JX58_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 214.0
  • Bit_score: 167
  • Evalue 1.70e-38
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 214.0
  • Bit_score: 167
  • Evalue 5.20e-39
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ADJ23194.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 214.0
  • Bit_score: 167
  • Evalue 2.30e-38

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
GTGATCCTTTCGGCCACTGCCGATGCCGCCCGTCATCTCGCCGGAAGGGCCCTCAGCCGCAAAGGCCACCGGACGCTGCTCGTCAGCGACGGCATCGACGGCGCAAGCGAGGCGCGCGACCTCGTATCCTCCCTCACGACCTCGGGACGCCGGTGCGTGCTGGTTGACTGGTCGCGCGATGGCCGGGGTATCGCCGCAAGCCTCGGAGCCGCTCAGCAGCCGGGCATCAATGACCTCCTCGATGGCCGGGCGAGCTTCGACGACGTGATCGTCCGGCTCCCCGACAGCGACGCGCATTTCATCGCCGCCGGTGCCCCGCCTGCCGATGCCAGCGCGCCGCTCGATGCCGGCTGGGTCAATCTCGTGCTCGATGCGCTCGACGAGGCCTACGACCAGATCGTGGTGGTGGCGCAGCTCGAGCAGGCGCGACCCCTGTTCGAGGCTATCGAGGGACGCTTCGACGCCGGCATCGTCATGTCCGACCGCCGCAGCCAGGGATCGACCATCAATGCCGGTCCCGGCGTCTTCCTCGGCTTCGAGGTGACGGAGATCTACATCGTCCAGCTCGATCTCGCCCCGCGCCGCGCCGCAGCGCGACGCTTCAAGCGCGCACGGCGGCAGGTGGCGGCCTAA
PROTEIN sequence
Length: 211
VILSATADAARHLAGRALSRKGHRTLLVSDGIDGASEARDLVSSLTTSGRRCVLVDWSRDGRGIAASLGAAQQPGINDLLDGRASFDDVIVRLPDSDAHFIAAGAPPADASAPLDAGWVNLVLDALDEAYDQIVVVAQLEQARPLFEAIEGRFDAGIVMSDRRSQGSTINAGPGVFLGFEVTEIYIVQLDLAPRRAAARRFKRARRQVAA*