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SCNpilot_expt_1000_bf_scaffold_6507_7

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 5583..6401

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000375F5F5 similarity UNIREF
DB: UNIREF100
  • Identity: 35.5
  • Coverage: 245.0
  • Bit_score: 144
  • Evalue 1.50e-31
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 258.0
  • Bit_score: 140
  • Evalue 8.80e-31
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACY17875.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.2
  • Coverage: 258.0
  • Bit_score: 140
  • Evalue 3.90e-30

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Taxonomy

Haliangium ochraceum → Haliangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
GTGACGACGCGCTTCAATACGATAACCGGAAGGCAGCCCTCGCGGCTGCCTTTTGGTTTTGTGGCGCTCGGCGTGCTCGGCGCGCTCGTCGGTGCAGCAATGCTTGCAGGAAGGCCGGCAATAGCGCAGGTCTCGAATGGCGACGTCGTGATCCTGGCCGTCGACTCGAGCCGCATTCCCGAGCCCGACGGCGCGGGCCATCGCGTCGCGCTGCGGCCGGTCGGCGATGGTGTCGAGGAAGTTGCCCGCGATCTCAATCAGCGCGGCGGCCTGCTGGGACGCCGTGTGCGCGTCACTCATGAGAACGACCAGTGCGAGGCCGAGGAAGCGGCCGTCATTGCCGCGCGCGCCGTTGCGAACGGCGTCAGCGTGGTGATCGGGCACCCGTGCTCGAGCGGCGCGATCAAGGCGGCGGCCCTCTACGCCCAGGCCGGCATTCTCATGATCGCGACCGGGCCGCGCCATCCACGCCTGACCAGCCCGGTGGCGCATCGCGGCATCTTCCGCCTCGCCGGACGTGATGATCGCCAGGACGAGAGCATCGCCACGCTGATCGCCGCGCGCTTCCCGACCGCGCGGGCGGCGATCATCCATGACCGCAGTGTTCAAGGGCGGGGCATGGCCGAGGAGATCCGGCGCAGCATGATCGCGGCGCAGGTGCCGCCGGCGCTGGTCGCGACGTACACCTCGGGCATCAAGGACCATGCAGCCATCGTCAGCGAGCTCGCCAAGGCCAAGGCGGATCTCGTCGTGTTCCCCGGCCAGCACGGATGTGCTGGCAGCCGACAGGCCGCCGGCGCGGCTGCTTGCGGCTGTTGA
PROTEIN sequence
Length: 273
VTTRFNTITGRQPSRLPFGFVALGVLGALVGAAMLAGRPAIAQVSNGDVVILAVDSSRIPEPDGAGHRVALRPVGDGVEEVARDLNQRGGLLGRRVRVTHENDQCEAEEAAVIAARAVANGVSVVIGHPCSSGAIKAAALYAQAGILMIATGPRHPRLTSPVAHRGIFRLAGRDDRQDESIATLIAARFPTARAAIIHDRSVQGRGMAEEIRRSMIAAQVPPALVATYTSGIKDHAAIVSELAKAKADLVVFPGQHGCAGSRQAAGAAACGC*