ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6567_14

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 7541..8260

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBJ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 218.0
  • Bit_score: 288
  • Evalue 7.30e-75
Transcriptional regulator {ECO:0000313|EMBL:AHB47847.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 218.0
  • Bit_score: 288
  • Evalue 1.00e-74
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 219.0
  • Bit_score: 266
  • Evalue 9.40e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
TTGCGCGGCGACTGCAAACTTGGCTTAGTGGTCGCACGCCACGGCTCCACTGACGGAGGTTCGGTCATTCGGGTTTTGCTCGTAGAGGATGACAAGGCAATCGCCGGCCGCCTTCTGGATGGCTTGGCGGAGGCGGGCTTTGTCACCGATCACATCGAGAATGGCGAGGATGCTTGTGCGATGGGCCGCGATCATCATTATGACGTGGCCATCCTCGATCTCGGCTTGCCGGGATTGGGAGGGTTGGGGGTGCTGGAATACTGGCGTGGCAGCGGAAGAAATTTCCCCGTGTTGATTTTGACGGCCCAGGGTTCGTGGTCGGAAAAGGTGAAGGGCTTGAACGCAGGCGCCGATGACTATATCGGCAAGCCTTTTCACATGCTCGAGATCATCGCGCGGATTCATGCCCTCGTGCGCCGGTCGGCCGGCGTGTCTCATCCCGTACTCACTCATAAAGACGTCACGCTCGATACCATCGCTGGAAGGGTCTATGTCGCCGGCCATCCAGTATCACTCACTGCGCATGAGTTGCGCATGTTGAGCTACTTTCTGCTGCGACCCGGTCGGCTTGTCTCGCAGAGGGACTTGGCCCAGCACCTCTACACCCTTGATGCCGAGGCAGAGTCCAATACGATCGAGGTCTATGTTGCGCGCCTGCGCAAGAAGCTCGGTAAGGACTTCATTACGACCCTACGCGGCCTCGGCTATCGATTGGATTGA
PROTEIN sequence
Length: 240
LRGDCKLGLVVARHGSTDGGSVIRVLLVEDDKAIAGRLLDGLAEAGFVTDHIENGEDACAMGRDHHYDVAILDLGLPGLGGLGVLEYWRGSGRNFPVLILTAQGSWSEKVKGLNAGADDYIGKPFHMLEIIARIHALVRRSAGVSHPVLTHKDVTLDTIAGRVYVAGHPVSLTAHELRMLSYFLLRPGRLVSQRDLAQHLYTLDAEAESNTIEVYVARLRKKLGKDFITTLRGLGYRLD*