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SCNpilot_expt_1000_bf_scaffold_8800_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(3123..4031)

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type transport system permease large protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TY62_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 300.0
  • Bit_score: 366
  • Evalue 2.00e-98
  • rbh
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KJB94421.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 300.0
  • Bit_score: 372
  • Evalue 5.20e-100
putative TRAP-type C4-dicarboxylate transport system, large permease component (dctm subunit) similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 302.0
  • Bit_score: 330
  • Evalue 5.10e-88
  • rbh

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCGCGAGCGCGGCTTCGATCCGGCATTCGCGGCAGCGGTCAGCGCGGCCTCCGCCACGATCGGGCCGATCATTCCGCCGAGCGTGATCATGGTGATCTACGGCCTGATGGCCCAGGTTTCGGTGGCCGACCTTTTCCTAGCGGGCATCCTGCCAGGCATCCTCATGGGCGTGGCGATGATGGGTATGGTCTATTTCCTGGCCGTGACGGGGCGCGTGCATTGCCCAGTGGAGCGGCGGGCGACCCTGGCCGAGCTGTCGCAATCTTTCATCGCCGGATTGCCGGCATTCCTTGCACCCATCGTGCTGGTCGGCGGCTTGATGCTCGGCATCGCAACGCCCACCGAGCTCGGTGCCTTGACGGTCGTCTATGCCATCGCGCTGGGTTTCTGGTATCGCGAGCTCACCTGGAAAATGGTGTTCGACGCCATAAACGAGACCCTCATTTTCTGCGGCGTCCTCGTCTTCATCATCGCCGCAGCCGTGCCGTTCGGATGGCTCATCTCGTTTACACGCCTGCCGGCAGAGCTGTCGGCCGTGGTGCTGCAATTCACGCAGGACCCTGTCGTCGTCCTTGCCATCATCAACGTGCTGCTGCTGTTCCTCGGCTGCTTCATGGAGACGACGGCGATCCTTCTGATCGTCACGCCGACGCTGCTGCCCATCATCCTCGCGGTCGGAATCGATCCTGTACACTTCGGCATCATCATCTCGCTGAACCTGATTGTCGGCGCCATAACGCCGCCCTTCGGGGTGATCCTGTTCATCTTGAAGGACATCGCCAAGATCAGTTTTGCGCAGATGGTGCGTGCGGTGCTGCCGTTCTATATCCCGCTGGGAATTGCGTTGCTGATCATCACCTACTGGCCTGGGTTCGTTTTGTTTGTGCCGTCGCTGTTCAAAGGTTGA
PROTEIN sequence
Length: 303
MRERGFDPAFAAAVSAASATIGPIIPPSVIMVIYGLMAQVSVADLFLAGILPGILMGVAMMGMVYFLAVTGRVHCPVERRATLAELSQSFIAGLPAFLAPIVLVGGLMLGIATPTELGALTVVYAIALGFWYRELTWKMVFDAINETLIFCGVLVFIIAAAVPFGWLISFTRLPAELSAVVLQFTQDPVVVLAIINVLLLFLGCFMETTAILLIVTPTLLPIILAVGIDPVHFGIIISLNLIVGAITPPFGVILFILKDIAKISFAQMVRAVLPFYIPLGIALLIITYWPGFVLFVPSLFKG*