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SCNpilot_expt_1000_bf_scaffold_9405_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: comp(6919..7404)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037BA47C similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 141.0
  • Bit_score: 237
  • Evalue 1.30e-59
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 141.0
  • Bit_score: 238
  • Evalue 6.30e-60
TraR/DksA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 156.0
  • Bit_score: 226
  • Evalue 5.50e-57

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 486
GGAAAGCTCGAGAACGGCAACGGCTCGCGAAAAGGAGGTCGCACCTCCGGCAAGCCCGATGCCCGCCACAGCGAGATCACGCTCAGTCCCGGCTACAAGCCCAGCGACGACGAGCCGTTCATGAACGAGCGGCAGCGCATCTACTTCAGAAACAAGCTCCTCGCCTGGAAAGAGGACATTCTCCGCCAGACCCGCGAGACGCTCATGGGCCTGCACAACGACACCTCCCAGCACGCCGACCTCGCCGACCGCGCCACATCGGAGACCGACAAGGCCCTCGAGCTCCGGGCCCGCGACCGCCAGCGCAAGCTGATCGGAAAGATCGATGCCGCGATTGCCCGCATCGACGACGGGAGCTACGGCTACTGCGAGGAGACGGGGGAGCCGATCAGCCTGAAACGGCTCGATGCGCGGCCGATCGCCACGCTGTCGATTGAGGCTCAGGAACGCCATGAGCGCCGCGAGCGGGTGTTCCGCGAGGATTGA
PROTEIN sequence
Length: 162
GKLENGNGSRKGGRTSGKPDARHSEITLSPGYKPSDDEPFMNERQRIYFRNKLLAWKEDILRQTRETLMGLHNDTSQHADLADRATSETDKALELRARDRQRKLIGKIDAAIARIDDGSYGYCEETGEPISLKRLDARPIATLSIEAQERHERRERVFRED*