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SCNpilot_expt_1000_bf_scaffold_9115_6

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 4374..5855

Top 3 Functional Annotations

Value Algorithm Source
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA {ECO:0000256|HAMAP-Rule:MF_01728}; EC=3.6.3.42 {ECO:0000256|HAMAP-Rule:MF_01728};; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 483.0
  • Bit_score: 611
  • Evalue 1.10e-171
Glucan exporter ATP-binding protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I6X6_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 483.0
  • Bit_score: 610
  • Evalue 1.30e-171
  • rbh
glucan exporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 483.0
  • Bit_score: 610
  • Evalue 4.20e-172
  • rbh

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Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1482
ATGGCGACGGCCTTCGATCAGGCGATCACGCTGCCCATCAGCTATCATGCGCGCAAGGGCTCGGGCGCCGTCATCCGCGCGATCCAGCAAGGCACGGACTGCCTGTTCGGTCTCTGGCTGGCCTTCATGCGCGATCATCTCGCCGCGCTCGTCTCGATCGCCCTGCTCATTCCGACGGCCCTGACGATCGATGTGCGCATGGCGGCGCTGCTGTTCGGCCTCGGCGCGGTCTATCTCGCCGCGAACATGTTCGTGTTCAAGCGCACGATCGATCAGCAAGGCGAGGTCGAGCGCTATCATCGCGAGCTTGCGGGACGCGTCGGCGACGTGCTCGGCAACGTGACGGTCGTGCAAAGCTACGTGCGCTTCGAAGCGGAGTCGCAGGCCCTGCGCGGCCTCATGCGCGAGCTGCTTGCCGCGCAGTATCCCGTTCTCTCGTGGTGGGCCGGCGTCATGGTGCTGACGCGTGCGGCATCGACCATCACGATGGTGGCCATCTTCGCGCTCGGCGCCCTTCTTGTTCAGCGCGGTGAGTTGACGGTCGGACAGGTTGTCAGCTTCGTCGCGTTTGCAAACCTACTGATCACGCGGCTCGACGCGCTCTCGCATTTCTTTCTCGGCCTCTTTCAGCAGAAGCCGGCGATCGACGCCTATTTCGATCTCGTGGACACGACGAGTCCGGTCCTCGACCGTCCAGGCGCGCGCGCGCTCGAACAGCCGCGCGGGCACGTGCGCTACGAGGATCTCACCTTCCGTTTTCCCGATGGCACGATCGGCGTCAAGGACGCGAACTTCGAGGCCCTGCCGGGCGAGACGGTGGCGCTCGTCGGGCATACGGGGGCCGGCAAGACCACGGCGCTCGCCTTGCTGCAGCGTCTGCGCGATCCGCAGGAAGGGCGCATCACCATCGATGGCCACGATGTGCGCGATGTCACGCTCGCCTCGCTACGGTCCTCGGTGGCCGTCGTCTTCCAGGATGCAGGTCTGTTCAACCGCACGATTGCCGAGAACATCCGCATCGGCAAGCCGGGCGCGACCGATGAAGAGGTGAAGCGCGCTGCCGAGCTTGCAGGTGCGCACGACTTCATCATGCGTAAGCAGGGCGGCTACGATTTCCTCATCGGCGAGCGCGGCACGGCGCTGTCTGGCGGCGAGCGTCAGCGCTTGGCGATCGCGCGTGCCATCCTCAAAGATGCGCCGATCCTCATACTCGACGAGGCGACGAGCGCACTCGATGCCGAGACCGAGGCGCGCATCAAACGTGCCCTCGATGCGCTCCGCAAAGGGCGCACCACTTTCATTATCGCGCACCGCCTCTCGACGGTCGCCAATGCCGACAAGATTATGGTGATGCAGCACGGCGAGATCATCGAGCGCGGCAAGTTCCGCGAGCTGGTCGATCAGGGCGGCCTCTTCGCGCGCCTCGTCGCCGAAGGCGGCTTCACCGAGCCGACCGAGGTCAAGGAGAAGACCGAGGCGTAG
PROTEIN sequence
Length: 494
MATAFDQAITLPISYHARKGSGAVIRAIQQGTDCLFGLWLAFMRDHLAALVSIALLIPTALTIDVRMAALLFGLGAVYLAANMFVFKRTIDQQGEVERYHRELAGRVGDVLGNVTVVQSYVRFEAESQALRGLMRELLAAQYPVLSWWAGVMVLTRAASTITMVAIFALGALLVQRGELTVGQVVSFVAFANLLITRLDALSHFFLGLFQQKPAIDAYFDLVDTTSPVLDRPGARALEQPRGHVRYEDLTFRFPDGTIGVKDANFEALPGETVALVGHTGAGKTTALALLQRLRDPQEGRITIDGHDVRDVTLASLRSSVAVVFQDAGLFNRTIAENIRIGKPGATDEEVKRAAELAGAHDFIMRKQGGYDFLIGERGTALSGGERQRLAIARAILKDAPILILDEATSALDAETEARIKRALDALRKGRTTFIIAHRLSTVANADKIMVMQHGEIIERGKFRELVDQGGLFARLVAEGGFTEPTEVKEKTEA*