ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10409_4

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_64_6

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 4 ASCG 7 / 38
Location: 2508..3128

Top 3 Functional Annotations

Value Algorithm Source
3'-5' exonuclease (EC:3.1.13.-); K03684 ribonuclease D [EC:3.1.13.5] similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 206.0
  • Bit_score: 308
  • Evalue 1.90e-81
  • rbh
3'-5' exonuclease {ECO:0000313|EMBL:CCB63616.1}; EC=3.1.13.- {ECO:0000313|EMBL:CCB63616.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 206.0
  • Bit_score: 308
  • Evalue 8.30e-81
3'-5' exonuclease n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8N9_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 206.0
  • Bit_score: 308
  • Evalue 5.90e-81
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGACGGCACACCAGATCTTCCTTCACCGCGGCGACCTCCCCGACGGCCTCGCCTTTACCGGCGCCGTGGCCGTCGACACCGAGACGCTGGGGCTGAAACCACATCGCGACCGCCTCTGTCTCGTGCAGCTCTCGGCCGGCGATGGCGCCGCCCACCTCGTCCAGCTCGACGGCACCGACTGGTCCGCCCCGCGGCTCAAGGCGTTGCTCACCGATCCGGGGATCACCAAGATCTTTCATTTCGCCCGCTTCGACGTAGCGGTGCTGGAGCAGTATCTCGGGGTCGTCACCGCGCCGATCTACTGCACGAAGATCGCCTCCAAGCTCGTACGGACGTACACCGACCGGCACGGCCTCAAGGACCTCTGCCACGAGCTGCTGGGCGTCGAGCTCTCGAAGCAGCAGCAGAGCTCCGACTGGGCTGCCACCACACTGTCCCAGCAGCAGCTCGCCTATGCCGCCTCGGACGTCCTGCACCTGCACGCACTGAAAACCACCCTCGACGCCATGCTCGCCCGCCAGGACCGCACGGCGCTCGCCGAGGCCTGCTTCCGATTCGTTTCCCAGCGGGCCAAGCTGGACCTCGCCGGCTTCGAGGACATGGATATCTTCAGCCACTGA
PROTEIN sequence
Length: 207
MTAHQIFLHRGDLPDGLAFTGAVAVDTETLGLKPHRDRLCLVQLSAGDGAAHLVQLDGTDWSAPRLKALLTDPGITKIFHFARFDVAVLEQYLGVVTAPIYCTKIASKLVRTYTDRHGLKDLCHELLGVELSKQQQSSDWAATTLSQQQLAYAASDVLHLHALKTTLDAMLARQDRTALAEACFRFVSQRAKLDLAGFEDMDIFSH*