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SCNpilot_cont_750_bf_scaffold_98_30

Organism: SCNPILOT_CONT_750_BF_Rhizobiales_64_37

near complete RP 48 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 11 / 38
Location: comp(26424..27107)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYC3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 219.0
  • Bit_score: 261
  • Evalue 9.10e-67
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 219.0
  • Bit_score: 261
  • Evalue 1.30e-66
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 216.0
  • Bit_score: 252
  • Evalue 1.00e-64

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Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCCGTCTCCCCAGACACAACCGAATTCCACCGCCGATGCCGCGCTGGTCGCCCGGATCCGGGCCGGCGACGAGGATGCCGTCCGCGCTCTGGTCCGCCGCAATAACCAGCGGCTGTTCCGCATCGCCCGCAGCATTCTGCGCGACGATGCCGAGGCTGAGGATGCCGTGCAGGAGGCCTATGTCCGCGCCTTCACCCATCTCGACGGCTTCCGTGGGGAGGCCCTGTTGTCCACCTGGTTGACGCGCATCGTCGTCAACGAGGCGCTCGGCCGCTTGCGGTCGCGGCGGCCGACCACGCCGTGGGTGGAAGATGTCGCCACCGATGGTGATGGCCAGGTGGTGCCGTTTCCCCTGATCTCGCCGCAGCCCGATCCGGAGCGTTCCATGGCCCAGCACGAAATCCAGAGCCTTCTCGAACGCGCCATCGATGCGCTGCCCGATCCGTTCCGCGTGGTGCTGGTCGCGCGGGTGCTCGAAGAGATGAGCATCGAGGAAACCGCCGCGCTGTTCGGCCTGCGGCCGGAAACGGTGAAGACGCGGCTGCATCGCGCGCGCGACATGCTTCGACGCGATCTCGAACAGCAGCTTGGGCCGATGCTGGCGCAGAGCTTTCCATTCGCCGGCGCGCGCTGCGAGCGCATGGCTGAAAAAGTTGTCATGCGTCTGCGCGAATTACGCTGA
PROTEIN sequence
Length: 228
MPSPQTQPNSTADAALVARIRAGDEDAVRALVRRNNQRLFRIARSILRDDAEAEDAVQEAYVRAFTHLDGFRGEALLSTWLTRIVVNEALGRLRSRRPTTPWVEDVATDGDGQVVPFPLISPQPDPERSMAQHEIQSLLERAIDALPDPFRVVLVARVLEEMSIEETAALFGLRPETVKTRLHRARDMLRRDLEQQLGPMLAQSFPFAGARCERMAEKVVMRLRELR*