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SCNpilot_cont_750_bf_scaffold_151_21

Organism: SCNPILOT_CONT_750_BF_Rhizobiales_64_37

near complete RP 48 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 11 / 38
Location: 21228..23636

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 763.0
  • Bit_score: 970
  • Evalue 3.40e-280
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 763.0
  • Bit_score: 970
  • Evalue 1.50e-279
Ribonuclease R n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215Z4_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 763.0
  • Bit_score: 970
  • Evalue 1.10e-279

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2409
ATGCCCTTGTCGAAATCCCGCAAGCCAAAACCCGACAAGCCGAAACGCCCGCTGCAACGATCCTCACACGCGTCGTCGCCTACTTCGGCGCGCTCGGCGCAGCCGCGCAGCCGCGGCGAGCTTCCGTCAAAAGACGAGTTGCTGGCTTTCGTCACCGCGCAAAAGGGGCCAGTCAGCATCGGCGAGGTCGCCCGCACTTTCGGCCTGAAGAATGCCGACCGCGCCGCGCTCAAGCGCGCGCTTCGCGAACTTTCCGACGACGGCACGCTGGAGCGGCGCGGCAAGACCCTGCACCACTCTGGCGCGCTCGCCTCGACAATCTTCGCCGACATCGTCACCCGTGACCGCGACGGCGACCTGATCGCCACGCCCGACGAATGGGACGAGGCGAATGGCCCTGCTCCGCGCATCATCGTGCGCGTGCCGCATCGCGTCCGCTCGCACGAAGCGGCCGGCATCGGCGACCGCGTGCTGCTGCATGTCGAGGACAATGGCGACGCGAACGATCCCGACCGTTACAGCGGCCGTGTCATCCGCCGCATCGACAAGGCGCGCCAGCGGGTGCTCGGCGTATTCCGCGCGCTGCCGAACGGCGGCGGACGGATGCTGCCCGTCGACAAGAAACAACTCAACCGCGAGATCGCGATCCCGCCGGGCGCGACCGGCGATGCCAAGAACGGCGATCTCGTCGCCGTGTCGCCCGCCGGCGCGCCGCGGCTCGGTCTGCCGCATGGCCGCGTGGTCGAGCGGCTCGGCTCGCTGGCGAGCGAAAAGGCCGTCAGCCTGATCGCCATCCACGCCCATAACATTCCGCAGGACTTCCGCGCCGACACGCTGACGGAAGCCGCCGCCGCGAAGCCGGTGACACTTGCCGGACGCGAGGACTGGCGCAAGCTGCCGATCGTCACCATCGATCCGCCCGACGCGAAAGATCATGACGACGCCGTGTTCGCGGAAGCCGATACCGATCCGGGCAATACCGGCGGCTTCGTGCTGACCGTCGCCATCGCCGACGTTGCGGCTTACGTCACCCCCGGCTCCGCGCTCGACCGCGAGGCGCTTATTCGCGGCAATTCGGTGTATTTCCCCGATCGCGTCGTGCCGATGTTGCCGGAGCGCATCTCCAACGATCTGTGCTCGCTGCGGCCGAAGGAGGACCGCCCGGCCCTCGCCGTGCGCATCGTCATCGATCCGTCGGGACGCAAGAAGACGCACAGCTTCCATCGGGTGATGATCCGCTCCGCCGCGAAGCTCGCTTACGCGCAGGCGCAGGCGGCGATCGACGGCCGGCCCGACGACACGACAGGCGTGCTGCTCGAGACGGTGCTGAAACCGCTCTATGACGCTTACGCCGCACTCAAGAATGCGCGCGCGCATCGCTCGCCGCTCGATCTCGATCTGCCGGAGCGCAAGCTGGTGCTCAATCCAGACGGCACCGTCGCGCGTGTCGTCGTCGCCGAGCGGCTCGAGGCGCACCGGCTGATCGAAGAATTCATGATCCTCGCCAATGTCTGCGCCGCCGAGACGCTGGAGCGCGCCGGCACGCCGCTCATTTATCGCGTGCACGACGAGCCAGGCATCGAGAAGGTCAACGCGCTGCGCGAATTCCTCAAGACGCTGGATATTCCGTTCGCCAAAGCCGGCGCGCTGCGCAGCCAGGCGTTCAATCACATCCTCGATCGCGTGCGCGGCAAGGATGCCGAGCAACTGGTCAGCGAGGTGGTGCTGCGCAGCCAGGCGCAGGCGGAATATTCGGAGCAGAACTACGGGCACTTCGGTCTCAATCTGCGCCGCTATGCCCACTTCACCTCGCCGATCCGCCGCTATGCCGATCTGATCGTGCACCGCGCGCTGATCCGCGCCTTGAAACTCGGCGACGACGGCCTGCCGGAATCGCAGGATCAGGCGGCACTGGCCGAGATTGCGGCACGCATTTCCGCCGCCGAGCGGCGAGCGATGCTGGCCGAGCGCGAAACCACCGAGCGGCTGATCGCCTATCATCTCGCCGACAAGATCGGCGCGAGTTTCGAGGGACGGATTTCCGGCGTGATCGCCGCCGGCCTGTTCGTCAAGCTCCACGAAACCGGCGCCGACGGCTTCATCCCCGCGCGCACCATCGGCAACGAATATTTCCGCTACGATGAAGCGGCGCATGCCATGGTCGGCTCGCGCAGCGGAGAAACCTATCGCCTCGGCGATCCGGTCACGGTTAAACTCGTGGAGGCGGCTCCGGTCGCCGGCGCATTGCGGTTCGAGCTCATGTCAGACGGCCGCACACGCGCTTCGTCCAACGCGGGCTCATTCCGCGCCCGCCGGTTCGACTCCGCCAAAGGCGAACGCAAGCACAAGGCCGAGAAGCGACGCGGCAAGAACAAACGGCACAAGAACAAACGGCACAAACACCCATGA
PROTEIN sequence
Length: 803
MPLSKSRKPKPDKPKRPLQRSSHASSPTSARSAQPRSRGELPSKDELLAFVTAQKGPVSIGEVARTFGLKNADRAALKRALRELSDDGTLERRGKTLHHSGALASTIFADIVTRDRDGDLIATPDEWDEANGPAPRIIVRVPHRVRSHEAAGIGDRVLLHVEDNGDANDPDRYSGRVIRRIDKARQRVLGVFRALPNGGGRMLPVDKKQLNREIAIPPGATGDAKNGDLVAVSPAGAPRLGLPHGRVVERLGSLASEKAVSLIAIHAHNIPQDFRADTLTEAAAAKPVTLAGREDWRKLPIVTIDPPDAKDHDDAVFAEADTDPGNTGGFVLTVAIADVAAYVTPGSALDREALIRGNSVYFPDRVVPMLPERISNDLCSLRPKEDRPALAVRIVIDPSGRKKTHSFHRVMIRSAAKLAYAQAQAAIDGRPDDTTGVLLETVLKPLYDAYAALKNARAHRSPLDLDLPERKLVLNPDGTVARVVVAERLEAHRLIEEFMILANVCAAETLERAGTPLIYRVHDEPGIEKVNALREFLKTLDIPFAKAGALRSQAFNHILDRVRGKDAEQLVSEVVLRSQAQAEYSEQNYGHFGLNLRRYAHFTSPIRRYADLIVHRALIRALKLGDDGLPESQDQAALAEIAARISAAERRAMLAERETTERLIAYHLADKIGASFEGRISGVIAAGLFVKLHETGADGFIPARTIGNEYFRYDEAAHAMVGSRSGETYRLGDPVTVKLVEAAPVAGALRFELMSDGRTRASSNAGSFRARRFDSAKGERKHKAEKRRGKNKRHKNKRHKHP*