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SCNpilot_cont_750_bf_scaffold_556_6

Organism: SCNPILOT_CONT_750_BF_Microbacterium_70_132

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 4 ASCG 12 / 38
Location: comp(2676..3491)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate 5-dehydrogenase-like protein {ECO:0000313|EMBL:KJL36915.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJL36915.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 271.0
  • Bit_score: 514
  • Evalue 7.60e-143
shikimate dehydrogenase substrate-binding domain-containing protein; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 269.0
  • Bit_score: 390
  • Evalue 4.90e-106
  • rbh
Putative shikimate dehydrogenase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VU96_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 271.0
  • Bit_score: 410
  • Evalue 1.40e-111
  • rbh

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 816
GTGCCGATCCTCAACAAAGACATGTCGCTGTGCATCTCCCTCTCCGCCCGCCCGTCGAACATCGGCACGCGGTTCCACAACTTCCTCTACGACGAGCTCGGACTGAACTTCGTCTACAAGGCGTTCGCCCCCACCGACATCACGGCCGCCATCCAGGGCGTGCGAGGGCTCGGCATCCGCGGGTGCTCGGTGTCGATGCCCTATAAGGAGGCGGTGATCCCCCTCGTCGACGTGGTCGAGGAGTCCGCAGCGGCGATCGCGTCGGTGAACACGATCGTCAACGACGACGGCGTGCTGACGGCGTCGAACACCGACTACGAGGCGGTCGCGTCGCTTCTCGCGAGCCACGCCGTCGACCCGGCGCTGCCGGTCGTCGTGCGCGGCTCCGGGGGCATGGGGAAGGCGGTGATCGCGGCGTTCCGCGGTGCCGGGTTCGACGACGTCACCGTGCTCGCCCGCAACCTCGCCGCGGGACGCACGATCGCCGATGCCTACGACTACCGCTTCACGGACACCGAGCCCGAGCCGTTCGCCGGCGTGCTCGTGAACGTCACGCCGCTCGGCATGAACGGGCCGGATGCCGCGGCTCTCGCGTTCTCGCACGAGCAGGTGGCTGCGGCATCCGTCGTCTTCGATGTCGTGGCGTTCCCGTCGGAGACGCCGCTCGTGCGCTCGGCGCGCGAGTCGGGCGTGCCGGTGATCACGGGTGCCGAGGTGATCGCACTGCAGGCCGCCCGCCAGTTCGAGCGGTACACCGGCGTCGCCCTCACCGCCGACCAGGTGGCGCGCGCGTCGGAGTTCTCGCGCGCCGAGTGA
PROTEIN sequence
Length: 272
VPILNKDMSLCISLSARPSNIGTRFHNFLYDELGLNFVYKAFAPTDITAAIQGVRGLGIRGCSVSMPYKEAVIPLVDVVEESAAAIASVNTIVNDDGVLTASNTDYEAVASLLASHAVDPALPVVVRGSGGMGKAVIAAFRGAGFDDVTVLARNLAAGRTIADAYDYRFTDTEPEPFAGVLVNVTPLGMNGPDAAALAFSHEQVAAASVVFDVVAFPSETPLVRSARESGVPVITGAEVIALQAARQFERYTGVALTADQVARASEFSRAE*