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SCNpilot_cont_750_bf_scaffold_556_20

Organism: SCNPILOT_CONT_750_BF_Microbacterium_70_132

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 4 ASCG 12 / 38
Location: 17677..18168

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 328
  • Evalue 4.70e-87
N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 163.0
  • Bit_score: 261
  • Evalue 1.60e-67
peptide deformylase n=1 Tax=Microbacterium yannicii RepID=UPI0002E2BF84 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 163.0
  • Bit_score: 277
  • Evalue 8.80e-72

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGGCGGTACGAGGCATCCGGGTCTTCGGCGACCCGGTTCTGAAGAGCGTCAGCGCGCCCGTCGGCGAGATCGACGAGGGCACCGAGGCGCTCGTGCGCGACCTGATCGACACCGTGCAGCTGCCGGGGCGGGCGGGGGTCGCCGCGCCGCAGATCGGTGTCGGCGTGCGGGCGTTCAGCTACAACGTGGACGGCGAGATCGGCTACGTGCTCAACCCGGTGCTCGTGGAGGTGGCGGGGGAGCCCGTGCTGACCGGCGAGGGGTGCCTGTCCGTGCCGGGCTTGTGGCACGACGTGCTGCGCTATCCGCACGCGAAGGTCGTCGGCATCGGGCTCGACGGCGCCGAGATCGTGCTCGAGGGTGACGGTCTCATGGCCCAGGCGCTGCAGCACGAGACCGATCATCTCGACGGCATGCTCTATCTCGACCGGCTCGAGCCGACCACCCGCCGGGTGGCGATGCGCGAGATCCGCGAGAGCGACTGGTTCTGA
PROTEIN sequence
Length: 164
VAVRGIRVFGDPVLKSVSAPVGEIDEGTEALVRDLIDTVQLPGRAGVAAPQIGVGVRAFSYNVDGEIGYVLNPVLVEVAGEPVLTGEGCLSVPGLWHDVLRYPHAKVVGIGLDGAEIVLEGDGLMAQALQHETDHLDGMLYLDRLEPTTRRVAMREIRESDWF*