ggKbase home page

SCNpilot_cont_750_bf_scaffold_1069_29

Organism: SCNPILOT_CONT_750_BF_Microbacterium_70_132

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 4 ASCG 12 / 38
Location: 28919..31069

Top 3 Functional Annotations

Value Algorithm Source
helicase n=1 Tax=Microbacterium yannicii RepID=UPI00035F6A66 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 720.0
  • Bit_score: 1196
  • Evalue 0.0
RNA polymerase-associated protein RapA {ECO:0000313|EMBL:KJL41383.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 716.0
  • Bit_score: 1373
  • Evalue 0.0
superfamily II DNA/RNA helicase, SNF2 family similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 722.0
  • Bit_score: 1176
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2151
ATGCCGACCACGGCAGCCGCTCAGCGGCAACGACGCTCGTCGTCCCGTCGAGACGACGACGCGCCCATCATCCCGATCCTCGCCCGCAAGGTGCGTGAGGTCGAGGCCAAGGCGCAGCGCGGGAAGCTCGGCCCGACCAACCGCGTGAAGTTCCAGGTGATCGCCTTCCTGGTTCGCGAAGAGCGCGCCCGGGTGAAGGCCGACACCGCGCTCGCCACTGACGTGCGCGCCGAACTGCTCAAGCGCCTTGACGGCGTGGCGACGATCCTCGCGAAGACCGCCGCCCGCGACACCTCGCTCATCCAACTGCTCGAGGTCGATCAGGCGACGTCGCCGGTGGCGCGCCGCATGCGCCGCGACTGGCTGCTCGAGTCGGGTGCCGAGCTCGCTCCCGACGAGCTGATCATCACGGATGCCGCCCCCGCCCCGGCCCCGGTCGTTCCGGCCGCGCTCGCCGAGCGTCAGGTGACGCCCGCCCAGGTGGAGTCGCGGCAGATGTCGAACCCGTTCCTCGCCCCCGACCTGACCTCCCGCCCCGCGGTCGACGCGCCGCGGCGCCGCCTCGACGGCTGGGAGCTGATGGGCCCGCTCTACAAGGCGTTCGAGACGGGTGCCGGCGGCGGATCGGCGTGCATGCCGCTGCCGCCCGTGCCCGAGTTCGACCGGCTCTCACCCAAGGGGCTCGAGGTCATGCCGCACCAGTCGCGGTTCCTCGAGGCCGTGCGCGAGGGGCACCGCACGTTCCTGCTGGCCGACGAGCCCGGCCTCGGCAAGACGGCCGAGTCGGTGCTCGCGGCATCCGTCGCAGGGGCCTATCCGCTACTGGTCGTCGTGCCCAACGTCGTCAAGATGAACTGGGCGCGCGAGGTGGCCCGCTGGACGCCGCAGCGTCGCGCGACCGTCATCCAGGGCGACGGCGAGGACGTCGACGCCTTCGCCGACGTCTTCATCGTGAACTACGAGATCCTCGATCGTCACCTGTCGTGGCTCAGCGAGCTGGGTCTGCGCGGCATGGTGGTCGACGAGGCGCACTTCATCAAGAACCTCACCTCGCAGCGGTCCCAGAACGTGCTCGCCCTCGCCACCCGCCTGCGCGAGCGCACCACGAACCCGCTGCTGCTCGCGCTCACCGGAACGCCCCTGATCAACGACGTCGAGGACTTCGACGCCATCTGGCGTTTCCTCGGCTGGACCAACGGGCAGAAGCCGGGCACCGAGCTCATGGCGAAGCTCGACGAGACGGGCTTCACGCCCGCCGACAAGGCGTTCTACCCGGAGGCGCGCAGCGCGGTGATCTCGATGGGCATCGTGCGGCGTCTGAAGACGGATGTCGCCGCCGACCTGCCCGACAAGCTGATCGCCGACCTGCCGGTGCAGCTCGACGACGAGTTCGGCCGGTCCATCCGGCAGGCCGAACGCGAGCTCGGCGAGCGCCTCGCCGCGCACTACCGCCGGGTCGTCACGGCCCGCGCCGACCGCCACGGCACCACGGTGCCCGCCGGCGAGGTCGACGAGGACGTCATCCGCATGGTCGCCCAGCACGAGCTCGACGAGTCGAAGGCCGCCGGAACGGGCTCGGAGAACGTCTTCACGATGGTGCGTCGCATCGGGCAGGGCAAGGCCCAGCTCGCCGCCGACTACGCCGCCCAGTTGCAGCGCTCGGTCGGCAAAGTCGTGTTCTTCGCCAAGCACATCGACGTCATGGACCAGGCCGAGGCGCACTTCGCCGCCGCGGGCGTGCGTGCTGTCTCGATCCGCGGCGACCAGACCTCGGTCGCCCGCCAGGAGGCGATCGACGCGTTCAACAACGACCCGGGCGTCGGCATCATCGTGTGTTCGCTGACCGCGGCCGGCGTCGGCGTGAACCTGCAGGCCGCCTCCAACGTGGTGCTCGCCGAGCTCAGCTGGACCGCGGCGGAGCAGACGCAGGCGATCGACCGCGTGCACCGCATCGGACAGGACGAGCCGGTCACCGCCTGGCGCATCATCGCCGCCCACACGATCGACGCGAAGATCGCCGAGCTGATCGACTCGAAGCAGTCGCTCGCCCTGCGCGCCCTCGACGGCGTCGCGGTCGAGCCCGGGTCGAGCGACTCCGTGCAGCTCGCGGCGCTCATCCACGTGCTGCGCCAGGCGCTCGGCGCCGCCTGA
PROTEIN sequence
Length: 717
MPTTAAAQRQRRSSSRRDDDAPIIPILARKVREVEAKAQRGKLGPTNRVKFQVIAFLVREERARVKADTALATDVRAELLKRLDGVATILAKTAARDTSLIQLLEVDQATSPVARRMRRDWLLESGAELAPDELIITDAAPAPAPVVPAALAERQVTPAQVESRQMSNPFLAPDLTSRPAVDAPRRRLDGWELMGPLYKAFETGAGGGSACMPLPPVPEFDRLSPKGLEVMPHQSRFLEAVREGHRTFLLADEPGLGKTAESVLAASVAGAYPLLVVVPNVVKMNWAREVARWTPQRRATVIQGDGEDVDAFADVFIVNYEILDRHLSWLSELGLRGMVVDEAHFIKNLTSQRSQNVLALATRLRERTTNPLLLALTGTPLINDVEDFDAIWRFLGWTNGQKPGTELMAKLDETGFTPADKAFYPEARSAVISMGIVRRLKTDVAADLPDKLIADLPVQLDDEFGRSIRQAERELGERLAAHYRRVVTARADRHGTTVPAGEVDEDVIRMVAQHELDESKAAGTGSENVFTMVRRIGQGKAQLAADYAAQLQRSVGKVVFFAKHIDVMDQAEAHFAAAGVRAVSIRGDQTSVARQEAIDAFNNDPGVGIIVCSLTAAGVGVNLQAASNVVLAELSWTAAEQTQAIDRVHRIGQDEPVTAWRIIAAHTIDAKIAELIDSKQSLALRALDGVAVEPGSSDSVQLAALIHVLRQALGAA*