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SCNpilot_cont_750_bf_scaffold_29

Search features with annotation key words

Displaying items 61-90 of 484 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_29_61
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73260..74207)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ51_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30317.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
LacI family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_29_62
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74285..75748)
DNA (1464bp) protein (488aa)
Putative sulfatase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T9Y0_ALCXX rbh
sulfatase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_750_bf_scaffold_29_63
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75774..76943)
DNA (1170bp) protein (390aa)
ABC transporter; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] rbh
ABC transporter related protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A429_STAND rbh
ABC transporter related protein {ECO:0000313|EMBL:ADH87849.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_29_64
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76959..78695)
DNA (1737bp) protein (579aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A428_STAND rbh
binding-protein-dependent transporters inner membrane component; K02011 iron(III) transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADH87848.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_29_65
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78709..79758)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00036A7F74
ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
SCNpilot_cont_750_bf_scaffold_29_66
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79912..81057)
DNA (1146bp) protein (382aa)
NnrS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQG1_NITHX
protein NnrS
NnrS {ECO:0000313|EMBL:ABE61536.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_29_67
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81071..81850)
DNA (780bp) protein (260aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035DC3D9
SCNpilot_cont_750_bf_scaffold_29_68
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81850..82560)
DNA (711bp) protein (237aa)
narI; respiratory nitrate reductase subunit gamma (EC:1.7.99.4); K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4]
Respiratory nitrate reductase, gamma subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRB8_AFIFE
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:EKS30994.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_750_bf_scaffold_29_69
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82562..83224)
DNA (663bp) protein (221aa)
Respiratory nitrate reductase delta chain {ECO:0000313|EMBL:ESR25759.1}; EC=1.7.99.4 {ECO:0000313|EMBL:ESR25759.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
narJ_[H]; Respiratory nitrate reductase delta chain (EC:1.7.99.4)
Respiratory nitrate reductase delta chain n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RKA5_9RHIZ
SCNpilot_cont_750_bf_scaffold_29_70
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83227..84759)
DNA (1533bp) protein (511aa)
nitrate reductase subunit beta; K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4]
Nitrate reductase, beta subunit n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SVA1_CAUSK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
SCNpilot_cont_750_bf_scaffold_29_71
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84770..88489)
DNA (3720bp) protein (1240aa)
nitrate reductase subunit alpha (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
Nitrate reductase Z subunit alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2JWI6_9PROT
Nitrate reductase Z subunit alpha {ECO:0000313|EMBL:EKE78977.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_750_bf_scaffold_29_72
unknown

Not on your lists

comp(88503..91202)
DNA (2700bp) protein (900aa)
Nitrite extrusion protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JU16_9PROT
Nitrite extrusion protein {ECO:0000313|EMBL:CPR22352.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
nitrite extrusion protein; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
SCNpilot_cont_750_bf_scaffold_29_73
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91423..92094
DNA (672bp) protein (224aa)
Transcriptional activator n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4T5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJB96551.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ftrB; transcriptional activator FtrB; K13642 CRP/FNR family transcriptional regulator, transcriptional activator FtrB
SCNpilot_cont_750_bf_scaffold_29_74
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92103..93422)
DNA (1320bp) protein (440aa)
O-linked N-acetylglucosamine transferase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3ABZ1_9PROT
O-linked N-acetylglucosamine transferase {ECO:0000313|EMBL:EME70308.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
O-linked N-acetylglucosamine transferase
SCNpilot_cont_750_bf_scaffold_29_75
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(93415..94779)
DNA (1365bp) protein (455aa)
TPR repeat-containing protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV49_9BACT
TPR repeat-containing protein {ECO:0000313|EMBL:EDY22437.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_29_76
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(94804..97155)
DNA (2352bp) protein (784aa)
TPR repeat-containing protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GJ30_9CYAN
TPR repeat-containing protein {ECO:0000313|EMBL:EKQ68908.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
glycosyltransferase 9 family protein
SCNpilot_cont_750_bf_scaffold_29_77
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97239..99191)
DNA (1953bp) protein (651aa)
TPR repeat-containing protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G2L8_9BURK
TPR repeat-containing protein {ECO:0000313|EMBL:EDT09648.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
tetratricopeptide repeat-containing protein
SCNpilot_cont_750_bf_scaffold_29_78
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99195..101294)
DNA (2100bp) protein (700aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034A6AE1
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:AIO30629.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_29_79
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101291..102580)
DNA (1290bp) protein (430aa)
Fosmidomycin resistance protein n=1 Tax=Burkholderia sp. KJ006 RepID=I2DLW5_9BURK
fosmidomycin resistance protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_750_bf_scaffold_29_80
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102712..103107)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5FWJ1_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:GAN76138.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_29_81
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103285..103938
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHF1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN76139.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_29_82
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103965..105335
DNA (1371bp) protein (457aa)
PQQ enzyme repeat family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPR0_GRABC
Dehydrogenase with coenzyme pyrrolo-quinoline quinone (PQQ) {ECO:0000313|EMBL:GAN76140.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
PQQ repeat-containing protein
SCNpilot_cont_750_bf_scaffold_29_83
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105356..106726
DNA (1371bp) protein (457aa)
GTPase Der n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZJN4_GLUDA rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
engA; GTP-binding protein EngA; K03977 GTP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_29_84
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106807..110121
DNA (3315bp) protein (1105aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E9G8_BRASB
SCNpilot_cont_750_bf_scaffold_29_85
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110189..111502)
DNA (1314bp) protein (438aa)
Putative hybrid sensor histidine kinase {ECO:0000313|EMBL:CBS87154.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBS87154.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative hybrid sensor histidine kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z884_AZOL4
putative hybrid sensor histidine kinase
SCNpilot_cont_750_bf_scaffold_29_86
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(111858..112532)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000370F8B5
two-component system regulatory protein
Two-component system regulatory protein {ECO:0000313|EMBL:ACO32302.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCNpilot_cont_750_bf_scaffold_29_87
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112686..113579)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036C9874
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADE86276.1}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).;"
SCNpilot_cont_750_bf_scaffold_29_88
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113828..114244)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GQ68_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48344.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
dioxygenase
SCNpilot_cont_750_bf_scaffold_29_89
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114283..115470)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5M1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ERF79746.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_29_90
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115601..116857)
DNA (1257bp) protein (419aa)
phbC; putative poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Alpha/beta hydrolase fold protein n=2 Tax=Acidiphilium RepID=F7S3Z1_9PROT rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EGO96118.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Displaying items 61-90 of 484 in total

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