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SCNpilot_cont_750_bf_scaffold_29

Search features with annotation key words

Displaying items 91-120 of 484 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_29_91
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117180..117791
DNA (612bp) protein (204aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YUY4_9PROT
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EKM98858.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
phaR; polyhydroxyalkanoate synthesis repressor PhaR
SCNpilot_cont_750_bf_scaffold_29_92
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

117818..118837
DNA (1020bp) protein (340aa)
homoserine O-acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31] rbh
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923).;"
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI000360428E rbh
SCNpilot_cont_750_bf_scaffold_29_93
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119000..120388
DNA (1389bp) protein (463aa)
flavin-containing monooxygenase (EC:1.14.13.8)
monooxygenase n=1 Tax=Patulibacter americanus RepID=UPI0003B74A94
TrkA protein {ECO:0000313|EMBL:BAQ49896.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_750_bf_scaffold_29_94
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120530..121777
DNA (1248bp) protein (416aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035E349C rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC59031.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_29_95
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121803..122666
DNA (864bp) protein (288aa)
Amino acid ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9V0_9BRAD rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJC59030.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_29_96
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122666..123646
DNA (981bp) protein (327aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037C7F1B rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL11198.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_29_97
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123636..124373
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJY7_BRAJP rbh
ABC transporter {ECO:0000313|EMBL:KGT76449.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_29_98
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124370..125089
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003645013 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC52538.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
ABC transporter ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_29_99
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125240..126004
DNA (765bp) protein (255aa)
Putative metallo-beta-lactamase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RC36_9RHIZ rbh
Putative metallo-beta-lactamase {ECO:0000313|EMBL:ESR23731.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
metallo-beta-lactamase
SCNpilot_cont_750_bf_scaffold_29_100
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126100..127272
DNA (1173bp) protein (391aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037C899D
acetylornithine deacetylase rbh
SCNpilot_cont_750_bf_scaffold_29_101
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127269..128258
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003771EFF rbh
putative hydrolase rbh
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ABQ31876.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_750_bf_scaffold_29_102
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128324..129316)
DNA (993bp) protein (331aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFH13658.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFH13658.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036DE378
D-isomer specific 2-hydroxyacid dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_29_103
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists

comp(129349..130350)
DNA (1002bp) protein (334aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KKT35244.1}; TaxID=1618829 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_12.;"
NAD-dependent epimerase/dehydratase id=5045913 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
NAD-dependent epimerase/dehydratase
SCNpilot_cont_750_bf_scaffold_29_104
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130361..130924)
DNA (564bp) protein (188aa)
Methyltransferase protein n=1 Tax=uncultured bacterium RepID=K2B8C4_9BACT
putative methyltransferase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
SCNpilot_cont_750_bf_scaffold_29_105
RLO_PLX_64_10, Bacteria

Not on your lists

comp(130935..132008)
DNA (1074bp) protein (358aa)
glycosyl transferase n=1 Tax=Streptomyces sp. CNY243 RepID=UPI0003614400
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_cont_750_bf_scaffold_29_106
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132182..134272)
DNA (2091bp) protein (697aa)
Molybdopterin oxidoreductase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CHQ6_9RHIZ rbh
Dimethyl sulfoxide reductase {ECO:0000313|EMBL:GAN76759.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
molybdopterin oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_29_107
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134369..134749
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003822DEF
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EHL96385.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
ModE family transcriptional regulator; K02019 molybdate transport system regulatory protein
SCNpilot_cont_750_bf_scaffold_29_108
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134746..135087)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V302_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFI52332.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_750_bf_scaffold_29_109
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135100..135441)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B48958
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_750_bf_scaffold_29_110
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135611..135982
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN76725.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_29_111
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136071..138785)
DNA (2715bp) protein (905aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036D8590
TIGR02302 family protein {ECO:0000313|EMBL:EHL96745.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_29_112
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138822..140144)
DNA (1323bp) protein (441aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus NBRC 13693.;"
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
diaminopimelate decarboxylase n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237F365 rbh
SCNpilot_cont_750_bf_scaffold_29_113
unknown

Not on your lists

comp(140188..140319)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_29_114
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140316..141743)
DNA (1428bp) protein (476aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Argininosuccinate lyase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVX6_GRABC
SCNpilot_cont_750_bf_scaffold_29_115
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141750..142352
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000380BB00
Thiol:disulfide interchange protein/alkyl hydroperoxide reductase {ECO:0000313|EMBL:GAN76164.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
thiol:disulfide interchange protein TlpA
SCNpilot_cont_750_bf_scaffold_29_116
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142427..143113
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F9B36D
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:KFC72862.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative fumarylacetoacetate hydrolase rbh
SCNpilot_cont_750_bf_scaffold_29_117
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143268..144077
DNA (810bp) protein (270aa)
exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQK2_GRABC rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:GAN78347.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_29_118
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144267..145361)
DNA (1095bp) protein (365aa)
GTP-binding protein YchF n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F309C4 rbh
GTP-binding protein; K06942 rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_bf_scaffold_29_119
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145361..145939)
DNA (579bp) protein (193aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] rbh
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Peptidyl-tRNA hydrolase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=PTH_ACICJ rbh
SCNpilot_cont_750_bf_scaffold_29_120
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(145967..146617)
DNA (651bp) protein (217aa)
50S ribosomal protein L25 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPN8_GRABC
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Displaying items 91-120 of 484 in total

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