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SCNpilot_cont_750_bf_scaffold_50_29

Organism: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(33896..34855)

Top 3 Functional Annotations

Value Algorithm Source
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 297.0
  • Bit_score: 343
  • Evalue 8.00e-92
  • rbh
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036C5CC1 similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 300.0
  • Bit_score: 402
  • Evalue 3.50e-109
  • rbh
HMGL-like protein {ECO:0000313|EMBL:KAK79730.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii CDC-H809-BH.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 305.0
  • Bit_score: 401
  • Evalue 1.40e-108

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Taxonomy

Bordetella holmesii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGCCCACCACTTCCACGACCGACGTGGTCCTGCGCGAGATGGGGCTGCGCGACGGCCTGCAAAGCATCGCCACCTTCATGCCGACCGCGGCGAAATGCGCCTGGATCAGCGCCGAGGCGGCGGCCGGGGTGCGCGAGATCGAGGTGACCAGCTTCGTGCCGCCCAAGCTGCTGCCGCAATTCGCCGATGCCGAGGCGGTGGTGGCGCATGCGCTGACGGTGCCGGGCCTGACGGTGGCCGCCCTGATCCCGAACCTGCGCGGCGCCGAGCGCGGGCTGGCGCTGGGGGTGCACAAGCTGAACTACGTGCTGTCGGTCAGCGAGACGCACAACATGAGCAACGTGCGCCGCAGCACGCAGGAGAGCGTGGACGATTTCCGCCGCATCGTCGCCGCCGTGCGCGCCGCGCCGAACCGGCCGCGGCTGTGCGCGGGGCTGGCCACCAGCTTCGGCTGCACCTTCGAGGGCGCGATCGACGAGGACCGGGTGCGGCGCATCGCCGTCGAGTTGGCCGAGGCCGGGGCCGACGAGCTGGCGCTGGCCGACACCGTCGGCTACGGCGATCCGGCGGCGGTGCGGCGGCTGTTCGCGGCGGTGAAGCGCGATGTCGGCGACCTGCCGGTGGGCGCGCATTTCCACGACACGCGCGGCGTGGGCGTGGCCAACGTGATGGCGGCGCTGGAGGTGGGGGTGCGGGCGTTCGACGCCTCGCTGGCCGGGCTTGGCGGCTGCCCGTTCGCGCCCGGGGCGACCGGCAACATCGTCATGGAGGACACCGCCTTCCTGTGCGAGACGCTGGGCTACGACACCGGCGTGGACATCGCGGCTTTGGCGAAAATCCGCGCGATACTGGCGGAGAACCTGCCAGGCACGCAGCTGCTGGGCAATGTCGCCAAGTCCGGCCTGCCGAAGCATTTCGTGCCGGCCCGGCTGCGCGCGCGCAGGGAAGCCGCGGAATGA
PROTEIN sequence
Length: 320
MPTTSTTDVVLREMGLRDGLQSIATFMPTAAKCAWISAEAAAGVREIEVTSFVPPKLLPQFADAEAVVAHALTVPGLTVAALIPNLRGAERGLALGVHKLNYVLSVSETHNMSNVRRSTQESVDDFRRIVAAVRAAPNRPRLCAGLATSFGCTFEGAIDEDRVRRIAVELAEAGADELALADTVGYGDPAAVRRLFAAVKRDVGDLPVGAHFHDTRGVGVANVMAALEVGVRAFDASLAGLGGCPFAPGATGNIVMEDTAFLCETLGYDTGVDIAALAKIRAILAENLPGTQLLGNVAKSGLPKHFVPARLRARREAAE*