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SCNpilot_cont_500_bf_scaffold_3003_21

Organism: SCNPILOT_CONT_500_BF_Sphingobacteriales_50_6

near complete RP 39 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: 18472..19116

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 208.0
  • Bit_score: 255
  • Evalue 6.10e-65
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 208.0
  • Bit_score: 255
  • Evalue 1.90e-65
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02777.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 208.0
  • Bit_score: 255
  • Evalue 8.60e-65

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 645
ATGTCAGTGTTAGATAAAAGGGAACAGATCCTTATAGTGGCGGAAGAGCTTTTTGGAGCCAACGGCTTTGACGGCACTTCTGTAAGAGACATTGCCCACAAGGCAGGGGTCAATCTGGCCATGATCTCCTATTATTTCGGCTCCAAGGAAAAGTTGCTGGAAGCCCTGATAGAATTCCGCGCAGGCTATGCCCACGGTATTTTGGAAGAGCTGAACAAGGACGAGAGCCTTAGCCCCTGGGATAAGATCGACAGGCTGGTAGACTTCTATGTAGACAGGATATTGAACAACCTCCAGTTCCACAACATCATGTACCGCGAATCCATCACCATGCGCAGTGATGAGATCAGGGATAAGCTCATAGCCATCAAACTCCGCAACCTGGAACAGATCACCAAGATCATCCAGGACGGTCGACAAAAGAAATTATTCCGGGAGGTCGATATCCCGATGACCGTAGGTTCCATGATGGGTACCATCTCCTCCTACACTCAGGCAAAGCCCTATGGTTGCATGATCCTTGCCCTTGGATACGATACTAACGACGAGACCTACCGCTCGATGCTTGCCCCCAGGTTAAAAGCCCACCTGAAACAATTGCTCAGGGCTCACCTGGACATAAGGAATGCTGAAGAACATAAATAA
PROTEIN sequence
Length: 215
MSVLDKREQILIVAEELFGANGFDGTSVRDIAHKAGVNLAMISYYFGSKEKLLEALIEFRAGYAHGILEELNKDESLSPWDKIDRLVDFYVDRILNNLQFHNIMYRESITMRSDEIRDKLIAIKLRNLEQITKIIQDGRQKKLFREVDIPMTVGSMMGTISSYTQAKPYGCMILALGYDTNDETYRSMLAPRLKAHLKQLLRAHLDIRNAEEHK*