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SCNpilot_cont_500_bf_scaffold_3865_9

Organism: SCNPILOT_CONT_500_BF_Sphingobacteriales_50_6

near complete RP 39 / 55 MC: 1 BSCG 42 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: 8798..9997

Top 3 Functional Annotations

Value Algorithm Source
anti-FecI sigma factor FecR n=1 Tax=Cytophagales str. B6 RepID=UPI0003B73B0A similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 399.0
  • Bit_score: 287
  • Evalue 2.10e-74
FecR protein similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 401.0
  • Bit_score: 280
  • Evalue 6.10e-73
FecR protein {ECO:0000313|EMBL:ACU02551.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 401.0
  • Bit_score: 280
  • Evalue 2.70e-72

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1200
GTGAGTAGTAGCAAAGCGCAACTGTTGGCATCCCTGGCGGAAAAATTTTTAGCCGGAGAGGCGACCCAGGCTGAAGAAGAGCAATTGCACCAACTGTACGACAGCTGGAATGATGATGAAGAAGAGGTGGTTACGGATACTGAACAGCCGGAAGTATTGCGTGCGGAAATCTTTCAGGCATTGAAGGAGCGGATCAACGCGGAAAGAGCGGCTTCGCCGAAGCGATCCCCGGGGCAGGAACGATCTGTGGGCTCGGGACATTCCTATAGAAAGATGTTCTGGCGCAGTGTTGCGGCAGCTGCCGTCATTGCCGTCGGGTTGTTGATCTATAATCAGACGGTGGTAAAGAAAGGGGCCGCCTCCCTGGAACAGAAAGCGCTCGCCATCAATAATCAACCGGTGGTACCCGGTAAGGACAAGGCAACCTTAACGCTTGCGGATGGCTCCGTAGTCGACCTGGACAGCTCCGACGCCAGCAGGATGGCGCAGCAGGGTGATACCCGTATCCGGATCAAGGATGGGAAAATAGTTTATGACCCCAGTAAGGCGGGCAGCGCTGCAACTGTATATAATACCATTACCACTTCAAGAGGGGGGCAGTACCAGGTGGTATTGCCCGACGGGACCAGGGTATGGCTCAATGCCACTTCTTCTATAAAGTTCCCGGTAGCTTTTGCGGGGAACAGCAGGGTAGTCGAGGTTTCGGGCGAAGCCTATTTTGAAGTAGCCAAAAACCCGGCCATGCCTTTTATAGCCAAAGTAAAGGATGTCGAGGTGGAGGTGTTAGGTACTCACTTCGATGTGATGGCTTATGGAGAGGAGGGAAAGATCGCCACCACGCTGCTGGAAGGAAGCGTAAGAGTGTCCAAGGGCAGGGAGAAGTATGCTATTGCACCGGGGCAGCAGGTGGTCTGGAGCGAAGATGGAGCGTTCAGCCTGAACACGGATGTGGACCTGGAAGAAGTGATAGCCTGGAAGAACGGGAAATTTCATTTCAATAATGTAGATATAAAAACCCTCATGCGCCAGATAGCCCGATGGTATGATGTCGATGTCGCATATGAAAATGTCGCAGAGGATATACGTCTTGGCGGCGTCGTATCCAGGAAGGAAGATATAAGACAGCTGCTCGATTATTTTGAGGTGGCGGGAAAGGTGCGATTCAGAGTGGAGGGGAGGAAGGTCATCGTGTCGAAATAA
PROTEIN sequence
Length: 400
VSSSKAQLLASLAEKFLAGEATQAEEEQLHQLYDSWNDDEEEVVTDTEQPEVLRAEIFQALKERINAERAASPKRSPGQERSVGSGHSYRKMFWRSVAAAAVIAVGLLIYNQTVVKKGAASLEQKALAINNQPVVPGKDKATLTLADGSVVDLDSSDASRMAQQGDTRIRIKDGKIVYDPSKAGSAATVYNTITTSRGGQYQVVLPDGTRVWLNATSSIKFPVAFAGNSRVVEVSGEAYFEVAKNPAMPFIAKVKDVEVEVLGTHFDVMAYGEEGKIATTLLEGSVRVSKGREKYAIAPGQQVVWSEDGAFSLNTDVDLEEVIAWKNGKFHFNNVDIKTLMRQIARWYDVDVAYENVAEDIRLGGVVSRKEDIRQLLDYFEVAGKVRFRVEGRKVIVSK*