ggKbase home page

SCNpilot_cont_500_bf_scaffold_829_2

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(574..1644)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037E53E9 similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 311.0
  • Bit_score: 297
  • Evalue 2.30e-77
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 312.0
  • Bit_score: 257
  • Evalue 8.40e-66
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ABR64014.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 312.0
  • Bit_score: 257
  • Evalue 3.80e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGGACGCAAGGGTAAGCTCAGCCCATATTCCTATTGATCCATTTGCCGATGAACCTCTCAGATGCGCCATCGACGTGAGCACCTCGTCGGTGCCCGCCGGAGAACAGTTCGACCTTTTTCGAACCTGGAACGAGGGGCTTGCTGATTTCCAACTCCTGCAGGACGCCGGCCCGTCGTTTCAGGTCCGTCAGCGAATGTGGCAGTTGGGTGATCTGGCGCTGGTCACCGCCGAATATCCCGGTTCCAGCTACGACGTTCGATGGGAGCATCGAAAACGACCGTTGCTGGATGATTTCATGCTGTACGTGCCGTTTTCACGGTCGCCTGATGGGACAATGAGCACCGGAAAGCCCGGCATGAAATGCCTGGCACTGCCGGGCGTCAGGTCGGGCAAAGACGATCTGTTTGTCGCGCTCTTTCTGCCGCGCACCTTGGTTGCAATCGACCCCTCGATGATCGAAGCCAACGACGCCACGTTGCACTTCCTGGCGGAGTATATGCTTCTGCTGCATCGCTCTCTTCCAGCCCTCAGGGAAGCGGATATACCGCACATAGTCACCGCGACGGCCAATCTGTTCGAGGCGGCCCTTGCGCCGTCCGACGATCACCTCGCTGCGGCACGGGCACCGGTCGCCGCGGTTACTGCCGCGCGTGTCACCCAAGTCATCATGGAAAGGCTCTCGGACCACGATCTGACGCCGGACAAGCTCTGCCGCGCGGCGGGCGTATCACGGTCCCGTCTCTATCGGATCCTCGAACCGGCTGGGGGGATATCCAACTATATCCGCCGAAAGCGCCTGCTCAAGACACGCGATGCCCTGGCGGACAGTTCCGACCGACGAACGATCTCCACTATCGCCGAGGAATGGGGCTTCACCGACGCCTCGGCCTACAGCCGGATGTTCAAGTCGGAATTCGGCCTCTCTCCCAAGGAGGCGCGCGAACTCGGCTGGCAAGGCGTCAGGCACTCCACCTGGCTGAGCATCGATCAGCCGATCGAAGAGGTCGGCAATCTGAGCAATCTTCTGATCAACAATTCCCTGGGGTTGTCACTTGCTCCCAAGCGATGA
PROTEIN sequence
Length: 357
MDARVSSAHIPIDPFADEPLRCAIDVSTSSVPAGEQFDLFRTWNEGLADFQLLQDAGPSFQVRQRMWQLGDLALVTAEYPGSSYDVRWEHRKRPLLDDFMLYVPFSRSPDGTMSTGKPGMKCLALPGVRSGKDDLFVALFLPRTLVAIDPSMIEANDATLHFLAEYMLLLHRSLPALREADIPHIVTATANLFEAALAPSDDHLAAARAPVAAVTAARVTQVIMERLSDHDLTPDKLCRAAGVSRSRLYRILEPAGGISNYIRRKRLLKTRDALADSSDRRTISTIAEEWGFTDASAYSRMFKSEFGLSPKEARELGWQGVRHSTWLSIDQPIEEVGNLSNLLINNSLGLSLAPKR*