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SCNpilot_cont_500_bf_scaffold_1449_24

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 25744..26535

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000369C0ED similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 255.0
  • Bit_score: 340
  • Evalue 1.80e-90
  • rbh
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 252.0
  • Bit_score: 340
  • Evalue 5.60e-91
  • rbh
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:KJX85706.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 252.0
  • Bit_score: 340
  • Evalue 2.50e-90

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGCCGGCAAAGACCGAAAAAGGATCTGCCGCCTCGGGCGGCGCGGTCGACCGGACGATCGCGCTCCTGGAATTGATGGCGCTGGCCGAAGAGCCGTTCAAGCTGTCGGACGCCGCGCATCGGCTTGGCATCCCGAAAAGCGCCGCGCACCGCATCCTGACGACGCTGATCGACAATGACTGGGCACGGCAAAACAGCGAAAGCGGCTGTTATTCGCTGACGATCCGCATGGCGCTGCTCGGCCAGCGGCAACTCGAGCATCTGAAGGCGAATGATCTCCGACAGCCCATCCTCAACGATCTTGCCGGGCAAACGCGCGAGCTGGTGCGACTGACAGCGGCACGCAACCACGAACTGGTCTGGATAGGCTCGGCACGAGGACGGCGTTCAGGCCTGGTCTACGAAGCGGACATGAGCGAGAGGATCGTGCCGTTCGCAACGGCAAACGGCAAGGCCTGGCTCGCCAGCCTGCCGCGCGAGGAGGCGCTGCGTATCGCGCTTGAGGCAGGGCTCGGCCGCCTGGGCGTCGGCGCCGCGCGCGCGATCACGACCATTGAAGCCCTCGGGCGGGAACTTGACCTCACCGCGAAACGCGGATTCGGCCTTGCCCGCGCAGAAGCGGAGGATGGCGTCGGCGCGATCGCCGTTGCAATCCGCGTACGGAACGATGTCGTGGGAACGATGAGCGTTGCGGCCCCCCTCACGCGGCTCCCCGAAGAGCGTCTCGAGGAGCTTCTGCCGCTGCTCCGTCGCGCCGCGGACAATATGGCGATCGCCTGGGAGAGTGCTTAG
PROTEIN sequence
Length: 264
MPAKTEKGSAASGGAVDRTIALLELMALAEEPFKLSDAAHRLGIPKSAAHRILTTLIDNDWARQNSESGCYSLTIRMALLGQRQLEHLKANDLRQPILNDLAGQTRELVRLTAARNHELVWIGSARGRRSGLVYEADMSERIVPFATANGKAWLASLPREEALRIALEAGLGRLGVGAARAITTIEALGRELDLTAKRGFGLARAEAEDGVGAIAVAIRVRNDVVGTMSVAAPLTRLPEERLEELLPLLRRAADNMAIAWESA*