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SCNpilot_cont_500_bf_scaffold_5739_7

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(6276..6704)

Top 3 Functional Annotations

Value Algorithm Source
IS298 transposase OrfA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CK19_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 142.0
  • Bit_score: 265
  • Evalue 2.30e-68
IS298 transposase OrfA {ECO:0000313|EMBL:EYR79798.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 142.0
  • Bit_score: 265
  • Evalue 3.20e-68
putative transposase for insertion sequence element similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 141.0
  • Bit_score: 171
  • Evalue 2.40e-40

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGTCCACGAAGATGACGGAAACGGATTGGGCGAACACGTTGGAGGTTTTCCGCGCCTGCCTGCCACGGCGTGGACGCAAAGCCGCGGACGACCGGTTGTTTCTGGAAGCGATGCACTTCTTTACGGTGGAGAATGTGCGCTGGCGCGCGTTGCCGGAACGCTTCGGCCACTGGAACTCAGTGTGGAAGCGCTTTGATCGGCTGAGCAAGGCCGGTGTGTTCGAAGCCTTTTTCGACACGCTGGCCGAGATGAGCGCATCGGCCCATTTGATCCAGATGTTCGATTCCACCATCGTGCGCGCCCATGTCTCGGCGGCCGGCGCAAAGGGGGGCAGCAAGGCCAAGCGCTCGGCCGCTCGCGTGGCGGGTTCACGACGAAAATCCACGCCAAGGCGGATAATTCAGGCGACATCATCGCGTTCGATCTGA
PROTEIN sequence
Length: 143
MSTKMTETDWANTLEVFRACLPRRGRKAADDRLFLEAMHFFTVENVRWRALPERFGHWNSVWKRFDRLSKAGVFEAFFDTLAEMSASAHLIQMFDSTIVRAHVSAAGAKGGSKAKRSAARVAGSRRKSTPRRIIQATSSRSI*