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SCNpilot_cont_500_bf_scaffold_14161_8

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 4827..5123

Top 3 Functional Annotations

Value Algorithm Source
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palus similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 99.0
  • Bit_score: 177
  • Evalue 8.10e-42
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VG92_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 99.0
  • Bit_score: 177
  • Evalue 5.70e-42
RNA modification protein, MiaB family; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 99.0
  • Bit_score: 177
  • Evalue 1.80e-42

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGTCTCCGCCGCGCAAGCTGCATATCAAGTCATATGGCTGTCAGATGAATGTCTACGATGCGCAGCGCATGGTGGACACGCTCGCGCCCGAAGGCTTCATCGAGACCGACAGTGTCGGCGACGCCGACCTGGTGATCCTCAACACCTGTCATATCCGCGAGAAGGCCTCCGAAAAGGTCTATTCCGAACTGGGGCGGCTGCGCGTCGCCCGCGAGGAGGCCGCGACCCGGGGCCGCGCCATGAACGTCGTCGTCGCCGGCTGCGTCGCGCAGGCGGAAGGCGACGAGATCATCCGC
PROTEIN sequence
Length: 99
MSPPRKLHIKSYGCQMNVYDAQRMVDTLAPEGFIETDSVGDADLVILNTCHIREKASEKVYSELGRLRVAREEAATRGRAMNVVVAGCVAQAEGDEIIR