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SCNpilot_cont_500_bf_scaffold_9392_10

Organism: SCNPILOT_CONT_500_BF_Pandoraea_64_5

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 4 ASCG 8 / 38 MC: 2
Location: comp(9176..9409)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037B1F5D similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 77.0
  • Bit_score: 156
  • Evalue 1.10e-35
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373, ECO:0000313|EMBL:AJE97429.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 77.0
  • Bit_score: 153
  • Evalue 1.30e-34
rpmB; ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 75.0
  • Bit_score: 140
  • Evalue 1.90e-31

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGGCACGCGTATGTCAAGTGACCGGGAAAGCGCCGATGGTCGGCAATAACGTTTCCCACGCCAACAACAAAACCAAGCGTCGTTTTCTTCCGAACTTGCAAAATCGCCGGTTCTGGGTTGAGACCGAAAACCGCTTTGTGCGCCTGCGCATTTCGAAGGCCGGCCTGCGCCTGATCGACAAGAACGGCATCGACGCCGTTCTGGCGGACCTGCGTTCGCGCAACGCCATCTAA
PROTEIN sequence
Length: 78
MARVCQVTGKAPMVGNNVSHANNKTKRRFLPNLQNRRFWVETENRFVRLRISKAGLRLIDKNGIDAVLADLRSRNAI*