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SCNpilot_cont_500_bf_scaffold_1751_19

Organism: SCNPILOT_CONT_500_BF_Rhodospirillales_70_8

partial RP 30 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 8 / 38
Location: comp(18879..19304)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 141.0
  • Bit_score: 215
  • Evalue 3.80e-53
twitching motility protein PilT n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003170F88 similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 141.0
  • Bit_score: 208
  • Evalue 5.70e-51
PilT domain-containing protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 141.0
  • Bit_score: 205
  • Evalue 1.20e-50

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
GTGACCCGCTACCTGCTCGACACGAACATCATCAGCAACGTCGTCAAGCCGATCCCCTCGCCGTCCCTGATCGCGTGGATGGCTCAACAACCCGACGACCGATTGTTCATCGCGTCCCTGACCCTCGCCGAGATCTGGCGAGGCATCCTGGACAAGCCGGCCGGCAAGCGACGGGATCAGCTCGAAGCCTGGTTCACCGGGCCAGTCGGCCCGCTCCGGCTCTTCGCCGGCCGGATCTTGCCCTTCGACGCAGAGGCCGGTCTGGCCTGGGCGCGTCTGATGGCCGAAGGGAGGGCGAGGGGCCGTACCCGGAGCGCCCTGGACACCGTCATCGCGGCCGTGGCGCAGGTCAACGACTGCACCGTCGTCACCGACAATGACCGGGATTTCGAGGGCGTGGCGTGCCTCAATCCCATCCGGGGCTGA
PROTEIN sequence
Length: 142
VTRYLLDTNIISNVVKPIPSPSLIAWMAQQPDDRLFIASLTLAEIWRGILDKPAGKRRDQLEAWFTGPVGPLRLFAGRILPFDAEAGLAWARLMAEGRARGRTRSALDTVIAAVAQVNDCTVVTDNDRDFEGVACLNPIRG*