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SCNpilot_cont_500_bf_scaffold_1762_1

Organism: SCNPILOT_CONT_500_BF_Rhodospirillales_70_8

partial RP 30 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 8 / 38
Location: comp(5..412)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 136.0
  • Bit_score: 218
  • Evalue 7.40e-54
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 136.0
  • Bit_score: 212
  • Evalue 7.00e-53
DNA-directed RNA polymerase subunit omega n=3 Tax=Acidiphilium RepID=RPOZ_ACICJ similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 136.0
  • Bit_score: 212
  • Evalue 2.20e-52

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Taxonomy

Acidocella aminolytica → Acidocella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGGCGCGCGTCACCGTTGAAGACTGCGTCCAGAAGGTCCCCAATCGCTTCGAGCTGGTGCTGCTCGCCGCCCAGCGCGCGCGCAACCTCAGCCGCGGTGAGGAACTGACGGTCGATCGCGACAACGACAAGAACCCCGTCGTCGCGCTCCGCGAGATCGCGGACGAAACCATCGAGCTCGGCCGCATCGAGCAGGATCTGATCAAGTCCCTGTCCCGCGCCCCGGAGCCGGAGCCGGCCGACGAGGAGGTGCTCGACCTCATCCCGACCGACCAGAACATCTTCGGGCTGCAGGACGTCACTGCCGAAGAGGAGGCCGCCGGCCTTCCCGTCGAGAACGAGGACATGTCCCCCGATGACATGGAAGCCGCGCTCGAGGCGGAACTCGCCGGCCGCCCGAGGCGCTAG
PROTEIN sequence
Length: 136
MARVTVEDCVQKVPNRFELVLLAAQRARNLSRGEELTVDRDNDKNPVVALREIADETIELGRIEQDLIKSLSRAPEPEPADEEVLDLIPTDQNIFGLQDVTAEEEAAGLPVENEDMSPDDMEAALEAELAGRPRR*