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SCNpilot_cont_500_bf_scaffold_5180_12

Organism: SCNPILOT_CONT_500_BF_Rhodospirillales_70_8

partial RP 30 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 8 / 38
Location: comp(14810..15346)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZ54_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 163.0
  • Bit_score: 209
  • Evalue 3.20e-51
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930, ECO:0000313|EMBL:KJB95736.1}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 168.0
  • Bit_score: 216
  • Evalue 3.70e-53
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 170.0
  • Bit_score: 208
  • Evalue 1.30e-51

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGACGACGACGAACGGCCGATGCTGGCCCTGGGCGGCAAGGTCTACATGACGCCCGAGGGGCACCGGCGGTTGCGGGACGAGTGGCACCAGTTGATGAAGGTCGAGCGGCCGCGCGTCGTGGAGATCGTGTCCTGGGCGGCCGGCAACGGCGACCGCAGCGAGAACGCGGACTACCAGTACGGCAAGCGGCGCCTGCGGGAGATCGACCGGCGCGCACGCTACCTGACGAAGCGGCTCGAGGCTGCGGAGGTGGTGGATCCGGCGCGACAGGCGGTGCGGGACCGCGTGTTCTTCGGTGCGACGGTCACCTATGTGGACGAGGCGGATGTCGAGCGCACCATCACCATCGTCGGCGCGGACGAGGCCGACATGGCGGTCGGCAAGATCAGCCTGACCGCACCGATCGCCGTGGCGCTGATCAAGGCGCGCGCGCAGCGGCACACGGAGGTCGCGGTGCATACGCCGCGCGGCGTCGAGATGATCGAGGTGCTGGACGTGCGCTACCCCGATCCGGAGCAACCCGCGCCCGGCTGA
PROTEIN sequence
Length: 179
MDDDERPMLALGGKVYMTPEGHRRLRDEWHQLMKVERPRVVEIVSWAAGNGDRSENADYQYGKRRLREIDRRARYLTKRLEAAEVVDPARQAVRDRVFFGATVTYVDEADVERTITIVGADEADMAVGKISLTAPIAVALIKARAQRHTEVAVHTPRGVEMIEVLDVRYPDPEQPAPG*