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SCNpilot_cont_500_bf_scaffold_7092_5

Organism: SCNPILOT_CONT_500_BF_Rhodospirillales_70_8

partial RP 30 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 8 / 38
Location: 3036..3293

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFA3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 83.0
  • Bit_score: 134
  • Evalue 4.80e-29
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EHJ60061.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 83.0
  • Bit_score: 134
  • Evalue 6.80e-29
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 72.0
  • Bit_score: 127
  • Evalue 1.90e-27

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Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGAAGCCGGACTACGCGGACATTCTGTGGCGATCGGACATCCTGGGAGAGCCGCGCGACCGCATCGCCGCCAGCCTTGGAACGACACTCAACAACGTGACCGTTCGCCTGCATCGGGCGCGCCAGACACTCCGAAAGAGACTGGAGGAGATGTGTCTGACCTGCCCGGTCCACGGATTCCTGGATTGCCGCTGCGACGAAGCCGAAGAGATCCGTCGGCGCGTGGTGGCGTCCAAATCGACCCGTGAATCAAGCTGA
PROTEIN sequence
Length: 86
MKPDYADILWRSDILGEPRDRIAASLGTTLNNVTVRLHRARQTLRKRLEEMCLTCPVHGFLDCRCDEAEEIRRRVVASKSTRESS*