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SCNpilot_cont_500_bf_scaffold_2992_3

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 822..1058

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspC n=2 Tax=Bradyrhizobiaceae RepID=F7QQM0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 141
  • Evalue 3.60e-31
Uncharacterized protein {ECO:0000313|EMBL:EKS35658.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 141
  • Evalue 5.10e-31
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 68.0
  • Bit_score: 132
  • Evalue 6.90e-29

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGTCTGCGCCTGAAGGATTGTTTGTTATGACGACTGGTACTGTGAAGTGGTTCAACGGCCAAAAGGGTTTCGGTTTCATTCAGCCGAGCGATGGCGGCACCGATGTGTTCGTTCACATCAGCGCTGTCGAGCGTGCTGGCCTGACCGGCCTCGCCGAAGGACAGAAGGTGTCCTTTGAGGCCAAGACGGACAAGATGCGCGGCAAGACCAGCGCGGAAAATCTGTCGCTTCTCTAA
PROTEIN sequence
Length: 79
MSAPEGLFVMTTGTVKWFNGQKGFGFIQPSDGGTDVFVHISAVERAGLTGLAEGQKVSFEAKTDKMRGKTSAENLSLL*