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SCNpilot_cont_500_bf_scaffold_2992_11

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 7990..8934

Top 3 Functional Annotations

Value Algorithm Source
rfaC; lipopolysaccharide heptosyltransferase I (EC:2.4.-.-); K02841 heptosyltransferase I [EC:2.4.-.-] similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 312.0
  • Bit_score: 458
  • Evalue 1.30e-126
  • rbh
glycosyl transferase family 1 n=1 Tax=Afipia birgiae RepID=UPI000315424E similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 308.0
  • Bit_score: 534
  • Evalue 5.90e-149
  • rbh
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:EKS35646.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 309.0
  • Bit_score: 534
  • Evalue 1.40e-148

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGCATGGAATTCTGTTCATCAAGACATCATCGCTCGGCGATGTCGTGCATCACATGCCGGCGGTCACCGACGCGCGGCGGCATGATCCGGACGCGCGGCTGACGTGGGTGGTCGAGGAAGCCTTCGCGCCGCTGGCGCGACTGCACCCTGCCGTCGATGACGTGATCCCTGTTTCGACGCGGCGCTGGCGCTCGCAGCTTCTGCAGCCCGCGACATGGCGCGAAATCTCGGCCTTCAAGGCGCGGCTGCGCGAGGTGAAGGCCGACAAAGTGATCGATACGCAGGGCCTGATGCGCTCGGCGCTGATCGCGCGCGCGGCGATAGGAGAGCGTCACGGCTACGATGCCGCGAGCATCAAGGAGCCGCTGGCGTCATGGTTCTACGACATCAAACATACGGTTGCGCGCGATCAGCATGCGGTGGCGCGCAACAGGGCGCTGACAGCGCTGAGCCTTGGCTATGCGCCCGATGCCGCGATTGATTACGGCCTGATCAAACCGCCGAAAGATAGCGGCGCGCCCTATGCCGTGCTGCTGCATGGAACGTCGCGCGCCGCGAAGGAATGGCGTGAGGTGGACTGGATCGGCACCGGCAAATGGCTGCGCGCGCAGGGCATCGATGTGGTGCTGCCATGGGGGAACGACGCCGAGCGATTGCGGTCCGAGCGGCTCAAGGCCGCCATTCCCGGCAGCCGCATTCTCGATCGCCAGCCGCTCGATGTTACCGCGAAGGTGATCGCGAATGCGTCGCTGGTGGTCGGTGTCGATACCGGGCTGCTGCATCTGGCGGCGGCTTACGGCGTGCCGTTGATCGCGGTGTTTCTCGCCACCGATCCCGGATTGACGGGGCCGGTCGGCAGCGGGCCGATCACGGTCGTCGGCGGGAAGGGCGTCTATCCGTCGTTCGAGCGCGTGATCGAGGCAGCGGAGAAGCTGCGGGCGTGA
PROTEIN sequence
Length: 315
MHGILFIKTSSLGDVVHHMPAVTDARRHDPDARLTWVVEEAFAPLARLHPAVDDVIPVSTRRWRSQLLQPATWREISAFKARLREVKADKVIDTQGLMRSALIARAAIGERHGYDAASIKEPLASWFYDIKHTVARDQHAVARNRALTALSLGYAPDAAIDYGLIKPPKDSGAPYAVLLHGTSRAAKEWREVDWIGTGKWLRAQGIDVVLPWGNDAERLRSERLKAAIPGSRILDRQPLDVTAKVIANASLVVGVDTGLLHLAAAYGVPLIAVFLATDPGLTGPVGSGPITVVGGKGVYPSFERVIEAAEKLRA*