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SCNpilot_cont_500_bf_scaffold_7624_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(162..1076)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVI5_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 300.0
  • Bit_score: 402
  • Evalue 3.40e-109
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 300.0
  • Bit_score: 402
  • Evalue 1.10e-109
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADJ24839.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 300.0
  • Bit_score: 402
  • Evalue 4.70e-109

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGACAAGCTCGAGGCCATGAATGCCTTTGCCAAGGTGGTCGCCCTTGGCAGCTACGCCGAGGCCGGCCGGGCGCTGGGCCTGACCCGGTCCGCGGTCAGCAAGGCCGTGATGGAGCTGGAGCAGCTCCTCGGGGCCCGGCTCCTCGACCGCACGACCCGGCGCGTGAACCCGACGGAGGCCGGGCTTTCCTACTACGAGCGTTGTCTCGATATTCTCTCGCGCATCGAGGAGACGGAGCTCCAGGTTTCGCGGCTCCACGACGAGCCCAAGGGGCTGCTTCGGGTCAATGCGCCCATGTCCTTCGGCACGCTCTATCTGGGCGAGGCCATTGCGGCATTCATGGCCGCCTATCCCGACCTCAATGTCGAGCTGACCCTCAACGACCGCTTCATCGATCCCGTCGAGGAGGGCGTCGACGTCACCATTCGCATTGCCGCGCTTGCGGATTCGAGCCTGATCGCGCGCAAGATTGCTCGCACCCGGCGCGTGGTCGTGGCATCACCCGCCTATCTCGCGGCGCACGGAACGCCCGCGACGCCCGAAGATCTCACAAACCACCGTTGGCTTGGCTATGCCCCCGGCATGTCGCTCCAGCGCTGGTCGTATGAAAAGGCCGACGGCACTTCCGGGTCAGTGGCGCTCAAGTGCGCGCTCAGCTCCAACAACGGGCACATCCTGCGCAATGCGGCGCTCGCCGGACAAGGCATCACGGAGCTTCCGACATTTCTTGTCGGGTGCGATATCGCGGCACGTGCTTTGACCGTCGCGCTGCCCACGCATTCGCGTAGCGAGCTGGGCATCTACGCGCTCTACACGCCGAACCGCTATCTGGCGGCCAAGACGCGCGTGTTCATCGATTTTCTTGTGGCCCGGATCGGCCCGCGTCCGGAGTGGGACCGGTTCGATGCATAG
PROTEIN sequence
Length: 305
MDKLEAMNAFAKVVALGSYAEAGRALGLTRSAVSKAVMELEQLLGARLLDRTTRRVNPTEAGLSYYERCLDILSRIEETELQVSRLHDEPKGLLRVNAPMSFGTLYLGEAIAAFMAAYPDLNVELTLNDRFIDPVEEGVDVTIRIAALADSSLIARKIARTRRVVVASPAYLAAHGTPATPEDLTNHRWLGYAPGMSLQRWSYEKADGTSGSVALKCALSSNNGHILRNAALAGQGITELPTFLVGCDIAARALTVALPTHSRSELGIYALYTPNRYLAAKTRVFIDFLVARIGPRPEWDRFDA*