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SCNpilot_cont_500_bf_scaffold_19147_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 1021..2022

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 333.0
  • Bit_score: 594
  • Evalue 9.30e-167
S-adenosyl-L-methionine-dependent methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 326.0
  • Bit_score: 503
  • Evalue 6.30e-140
  • rbh
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P534_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 333.0
  • Bit_score: 594
  • Evalue 6.60e-167
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGTCGCCCGACGATCAGCCCGTTCGCCACGTTCCGGTTCTCGGTCATGAGGCCGTGGACGCGCTCGCGCCCCGTGACGGCGGCATTTATGTGGATGCGACGTTCGGCGCAGGCGGTTACACGCGCGGCATCCTGAAAACCTCCGGCACCCGCGTGATCGCCATCGATCGTGACCGCACCGCTATCGCCGCCGGGTTTAGCCTTGTTGATTCGTCCGAAGGGCGACTGACCCTGGTGGAGGATCGCTTCTCCAATCTCGCCGATGTCTGCGCCGCACAGGGCGTTGCCGCCGTCGATGGCGTCGTAATGGATGTCGGCGTCTCGTCGATGCAACTCGATCAGGGCGAGCGCGGCTTTTCTTTCCGGTTCAACGGCCCGCTCGACATGCGGATGGGACAGGATGGGCCGACCGCCGCCGACGTGGTCGCCAGGGCATCCGAGACGGACCTCGCCAACATCATCTATATTTTCGGCGAAGAGCGGCACTCGCGCGCGGTGGCGCGCGCCATCGTCGCCGCGCGGAAGGAAGCGCCGATTACAACCACCCGCGCTCTGGCCGACATTGTCGCGCGCGTGGTGCGTTCCAAGCCGAACGAGATTCATCCGGCCACACGGACGTTCCAGGCCCTGCGTATCTTCGTCAACGAAGAGCTGGACGAACTGCATGCGGCGCTTGTGGCGGCCGAACAGATCCTGAAGCCCGGCGGGCGGCTGGCGGTGGTGTCGTTCCATTCGCTGGAAGACCGTATCGTCAAGAATTTCCTCAATGAACGCGGCAAGCGCGGCGGCGGTTCGCGGCACTTGCCGGAAGTCGATCAGGCGCAGCCGAGTTTTGAAATTCTGACCAAGCGTCCGACCGTGGCCGGCGATGAGGAAGTTGCAGCCAATCCACGCGCACGGTCTGCGAAATTGCGCACCGCAGCGCGGACGGCCGCGCCTGCATTGCCCGAGACGGCTTCCTTCGACTGGCCCCAACTCACTGATGTGATGAGGGGAGGCTGA
PROTEIN sequence
Length: 334
MSPDDQPVRHVPVLGHEAVDALAPRDGGIYVDATFGAGGYTRGILKTSGTRVIAIDRDRTAIAAGFSLVDSSEGRLTLVEDRFSNLADVCAAQGVAAVDGVVMDVGVSSMQLDQGERGFSFRFNGPLDMRMGQDGPTAADVVARASETDLANIIYIFGEERHSRAVARAIVAARKEAPITTTRALADIVARVVRSKPNEIHPATRTFQALRIFVNEELDELHAALVAAEQILKPGGRLAVVSFHSLEDRIVKNFLNERGKRGGGSRHLPEVDQAQPSFEILTKRPTVAGDEEVAANPRARSAKLRTAARTAAPALPETASFDWPQLTDVMRGG*