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SCNpilot_cont_500_bf_scaffold_19147_4

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 2437..2790

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein n=1 Tax=Afipia birgiae RepID=UPI00031F6FC2 similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 112.0
  • Bit_score: 179
  • Evalue 2.40e-42
Uncharacterized protein {ECO:0000313|EMBL:EKS35836.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 112.0
  • Bit_score: 178
  • Evalue 5.60e-42
division-specific transpeptidase, penicillin-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 112.0
  • Bit_score: 168
  • Evalue 1.00e-39

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGACCGATCAGACGCTCGACATCAAACGCCCGGCGGAACCCTGGCGGCAGCGCATGATCCGCACCTTGTTGTATGGGCGCAATGTCGACCGTGCCGCGAAAGCACGCGCGCGTGTGGGCCTTGCGATCATTGCATTCGCCGTCGTCTACACGATTATCGCCGGTCGGCTTGTGATGTTCGCGGTAGGTGCGGACACTCACGGCAACCGGCGCACGGTGTCGCAGGACGCGATCGCCACGGCGCGTCCCGACATTCTCGACCGCAACGGTGCCATTCTCGCCACCGACGTGAAGTCGCCTTCGCTGTTCGGCGAACCGCGCCGCCTGATCCGAAGAAGGGCTTTGTCTGGCTAA
PROTEIN sequence
Length: 118
MTDQTLDIKRPAEPWRQRMIRTLLYGRNVDRAAKARARVGLAIIAFAVVYTIIAGRLVMFAVGADTHGNRRTVSQDAIATARPDILDRNGAILATDVKSPSLFGEPRRLIRRRALSG*