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SCNpilot_cont_500_bf_scaffold_244_157

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 156893..157486

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 197.0
  • Bit_score: 330
  • Evalue 1.50e-87
ABC transporter permease; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 198.0
  • Bit_score: 326
  • Evalue 8.20e-87
2'-5' RNA ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL26_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 197.0
  • Bit_score: 330
  • Evalue 1.10e-87
  • rbh

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGCCGCGTCTCTTTACAGCCCTCGAAATTCCGCGCGACGCCGCCCTTTCCCTGTCGCTGCTCCGCGGCGGCCTGCCCGGCGCCCGCTGGGTCGACGTCGAAAACTACCATCTGACCCTGCGCTTCATCGGCGATGTCGAAGGCCACGTGGCCGACGAGATCGCCAATGCGCTCGATCGCGTGCGGCGGCGCTCCTTCCAGCTCACCCTTTCGGGCGTCGGCGCTTTCGGTTCGAAGAAGCCGCACGCGCTATGGGCGGGCGTCACGGCTTCGCCCGACCTCAATGCATTGCAGGCCGAGATCGAGCGCATCTGCCAGCGGCTCGGGCTGCCGGCCGACGCCCGCAAGTTCATGCCGCATGTCACGATCGCGCGGCTCAGGAACGTCAACCCGGCGGAGGTCGCCGCCTATCTCTCGGCGCGCGGCAATTTCCGCACGTCACCCTTCCGTGTCTCGCGCTTCGTGCTGATGTCGTCGAAGGATTCGGTCGGCGGCGGCCCCTATGTCGTCGAGGAAGCCTGGCCGCTGACGCCGGGCGAAACCGCGCGTTCCCATGCGGCGCCGGCGGCCGACGCGTGGCGCATCGGACGATAG
PROTEIN sequence
Length: 198
MPRLFTALEIPRDAALSLSLLRGGLPGARWVDVENYHLTLRFIGDVEGHVADEIANALDRVRRRSFQLTLSGVGAFGSKKPHALWAGVTASPDLNALQAEIERICQRLGLPADARKFMPHVTIARLRNVNPAEVAAYLSARGNFRTSPFRVSRFVLMSSKDSVGGGPYVVEEAWPLTPGETARSHAAPAADAWRIGR*