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SCNpilot_cont_500_bf_scaffold_242_21

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 19428..20105

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003763AF2 similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 225.0
  • Bit_score: 350
  • Evalue 1.50e-93
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EGP55462.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 225.0
  • Bit_score: 347
  • Evalue 1.80e-92
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 224.0
  • Bit_score: 341
  • Evalue 2.80e-91

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCGACTGCTCCTCATCGAGGACGACAAGAAGACAGGCTCCTTCGTGGCGCGGGGGTTGGGCGAAGAGGGCCATGTCTGCGATGTGATTGAAGACGGCCAAGATGGGCTGTTCCATGCGCTGCGCGAAGCCTACGACGTGATCGTCGTCGACCGCATGATCCCGACGTTAGACGGTCTGTCGCTGGTCAAGGCCATGCGCTCGGCCGGCAACCGGACGCCGGTTCTATTTCTGACCTCCGTTGGCGGGATCGACGACCGAGTGGAGGGTCTGGAAGCGGGCGCGGACGACTATCTGGTCAAGCCGTTTGCATTCTCGGAACTGCTGGCGCGTGTGAACGCACTCGCGCGCCGTCCGCCCGCCGCCAATGAGAGGACCGTGCTAGAGACGGCCGACCTCAGGGTGGATTTGATCCGCCGCCGGGTGAGCCGCGCTGGAAAGCCGATTGACCTGCAGCCTCGCGAATTCACACTGCTTGAGGTATTGATGCGGGCGGAAGGCCGCGTGCTCACACGCACCATGCTGCTCGACCGGGTTTGGGGTATCCATTTTGATCCAGGCACCAGCGTCGTAGAATCACATATCAGTCGTCTCAGGTCCAAGGTCGATAAACCTTTCACACAGCCTCTGCTGCATACGATACGCAATATCGGCTACTCGCTGCATGCGCCGCGATAA
PROTEIN sequence
Length: 226
MRLLLIEDDKKTGSFVARGLGEEGHVCDVIEDGQDGLFHALREAYDVIVVDRMIPTLDGLSLVKAMRSAGNRTPVLFLTSVGGIDDRVEGLEAGADDYLVKPFAFSELLARVNALARRPPAANERTVLETADLRVDLIRRRVSRAGKPIDLQPREFTLLEVLMRAEGRVLTRTMLLDRVWGIHFDPGTSVVESHISRLRSKVDKPFTQPLLHTIRNIGYSLHAPR*