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SCNpilot_cont_500_bf_scaffold_1055_6

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 5721..6074

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein trbE n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW1_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 77.0
  • Bit_score: 154
  • Evalue 8.10e-35
trbE2; conjugal transfer protein trbE; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 77.0
  • Bit_score: 154
  • Evalue 2.50e-35
Conjugal transfer protein trbE {ECO:0000313|EMBL:AEI05262.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 77.0
  • Bit_score: 154
  • Evalue 1.10e-34

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
TTGATCCAGCGTCGCACCGGTCGTGCCAAACTCTCCGAGACTAAGATCAACACCGCGATCGCCGGGCACAAGCGCCCCTATCAACAGCGAGCGATCCGCGCCGCGTCACTTGCGATGGGCGGCGACTGGCATGATCTCGGCGGCGGGCTGACCGAAGGGGACGAGTTCTCCGTTTCGCTCCAGCCACTCGCCCGCATCCACGACACCTATGAACGCGCCTGGGCCGCCGACTGGATCGTCGCGATACTCCTGCGTGAAGGCATCGCGATCACGCCCGAGGTGAAGGAGCATCTTTGGAGGGCGCTGACCTCGCTCGCTTCGCCGCACCCGTCGCATTGTCTCCGATGCTGGTGA
PROTEIN sequence
Length: 118
LIQRRTGRAKLSETKINTAIAGHKRPYQQRAIRAASLAMGGDWHDLGGGLTEGDEFSVSLQPLARIHDTYERAWAADWIVAILLREGIAITPEVKEHLWRALTSLASPHPSHCLRCW*