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SCNpilot_cont_500_bf_scaffold_1914_6

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 6180..6521

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHS9_GLUDA similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 113.0
  • Bit_score: 210
  • Evalue 1.20e-51
conjugal transfer protein Trbc; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 113.0
  • Bit_score: 210
  • Evalue 3.80e-52
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ACI52557.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 113.0
  • Bit_score: 210
  • Evalue 1.70e-51

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Taxonomy

Gluconacetobacter diazotrophicus → Gluconacetobacter → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGATCCGCGTTCTCGCCACCGCTCGCCGTCTGCACCGGCGCGCCCTCGACGTCGTCACCATCGCCGCGCTCTCGCTGGCCTTCGCTCCTGCGGCCTACGCCTCCGGCTCCTCCATGCCGTGGGAGACGCCGCTCAACTCCATCCTGGAGTCGGTTCAGGGTCCCGTCGCCAAGATCATCTCCGTCATCATCATCACGGTGACGGGCCTGACCCTCGCCTTCGGCGACACCTCGGGCGGCTTCCGCCGGTTGATCCAGATCGTCTTCGGGCTGTCGATCGCCTTCGCCGCGTCGAGCTTCTTCCTGACCTTCTTCAGCTTCTCGGGCGGGGCGCTGGTCTGA
PROTEIN sequence
Length: 114
MIRVLATARRLHRRALDVVTIAALSLAFAPAAYASGSSMPWETPLNSILESVQGPVAKIISVIIITVTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLTFFSFSGGALV*