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SCNpilot_cont_500_bf_scaffold_1963_18

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(16315..17271)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 336.0
  • Bit_score: 591
  • Evalue 9.80e-166
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 336.0
  • Bit_score: 584
  • Evalue 2.10e-164
DNA-directed RNA polymerase subunit alpha n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVC9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 336.0
  • Bit_score: 591
  • Evalue 7.00e-166

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGATCCAGAAAAATTGGCAGGAACTCATCAAGCCGAACAAGGTGGAGTTCTCCTCCAAGGGCAAGACGATGACGACGCTGGTGGCCGAGCCGCTGGAGCGTGGCTTCGGCCTCACCCTCGGCAACGCGCTGCGGCGCGTGCTGCTTTCGTCGCTCCGCGGCGCCGCCGTGACGGCGGTCCAGATCGACGGCGTGCTGCATGAATTCTCCTCGATCTCGGGCGTCCGCGAGGATGTGACCGACATCGTGCTCAACATCAAGGAAATCGCCATCAAGATGGAAGGCGACGGGCCGAAACGCATGGTCGTGCGCAAGCAGGGCCCGGGCGTCGTCACCGCCGGCGACATCCAGACGGTGGGCGATGTCGAGATCCTGAACCCCGACCACATCATCTGCACGCTCGACGAGGGTGCGGAGATCCGCATGGAATTCACCGTCGACAGCGGCAAGGGCTACGTGCCCGCCGAGCGCAACCGCGCCGAGGACGCGCCGATCGGCCTGATCCCCGTCGACAGCCTCTATTCGCCGGTCAAGAAGGTCTCCTACAAGGTCGAGAACACCCGCGAGGGGCAGGTTCTCGACTACGACAAGCTGACCATGACGATCGAGACCGACGGTTCGGTCACGGGCGAGGACGCGGTGGCGTTCGCCGCGCGCATCCTGCAGGACCAGCTCGCGCTGTTCGTCAATTTCGAGGAGCCGCACAAGGAACAGCCGCAGGAGCAGGTCACCGAGCTCGCGTTCAATCCGGCGCTGCTCAAGAAGGTCGACGAGCTCGAGCTTTCGGTGCGTTCGGCCAACTGCCTGAAGAACGACAACATCGATTTCGGCCGCAAGTCGCTGAACGAGATCAAGGAAGTGCTCGCCGCCATGGGCCTGCATCTCGGCATGGAAGTGCCGGATTGGCCGCCGGAGAACATCGAAGATCTCGCCAAGCGCTACGAAGACCAATATTGA
PROTEIN sequence
Length: 319
MIQKNWQELIKPNKVEFSSKGKTMTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSISGVREDVTDIVLNIKEIAIKMEGDGPKRMVVRKQGPGVVTAGDIQTVGDVEILNPDHIICTLDEGAEIRMEFTVDSGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTMTIETDGSVTGEDAVAFAARILQDQLALFVNFEEPHKEQPQEQVTELAFNPALLKKVDELELSVRSANCLKNDNIDFGRKSLNEIKEVLAAMGLHLGMEVPDWPPENIEDLAKRYEDQY*