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SCNpilot_cont_500_bf_scaffold_15204_1

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_67_10

partial RP 27 / 55 BSCG 26 / 51 ASCG 3 / 38
Location: 3..395

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/choline ABC transporter,permease component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQZ1_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 129.0
  • Bit_score: 171
  • Evalue 4.20e-40
Osmoprotectant uptake system permease {ECO:0000313|EMBL:AIB14081.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 129.0
  • Bit_score: 172
  • Evalue 4.50e-40
glycine betaine/choline ABC transporter,permease component similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 129.0
  • Bit_score: 171
  • Evalue 1.30e-40

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Taxonomy

Azospirillum brasilense → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
GTCACGCCGGCGATCATCGCGCTGACGCTCTATTCGCTGCTGCCGATCGTCAGGAGCACCGCGGCCGGGCTCGCCGCGGTGCCGACCGCGGCGATCGAGGCGGCGCGCGGCATCGGCATGACCCGCGGCCAGATCTTCCGCGCCGTCGAAGTGCCGCTGGCGCTGCCGGTGCTGGTCGCCGGCCTCCGCGTCACCGTCGTTCAGGCGGTCGGGCTCACCGCGGTGGCGGCGCTGATCGGCGCCGGCGGGCTCGGCGCGATCATCTTCCAGGGTCTCAATGCCAGCGCCATCGACCTCGTCATGCTCGGCGTCGTGCCGCTGGTCGGCATCGCCGTGCTCGCCGATCTCGCCCTGAAGCTCGCGGGCGCCATGCTGAAAGCGAGGACCGGATGA
PROTEIN sequence
Length: 131
VTPAIIALTLYSLLPIVRSTAAGLAAVPTAAIEAARGIGMTRGQIFRAVEVPLALPVLVAGLRVTVVQAVGLTAVAALIGAGGLGAIIFQGLNASAIDLVMLGVVPLVGIAVLADLALKLAGAMLKARTG*