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SCNpilot_expt_500_p_scaffold_3856

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3856_1
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

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2..436
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N539_ANATU
hypothetical protein; K07030
Tax=RBG_13_Chloroflexi_52_12_curated
SCNpilot_expt_500_p_scaffold_3856_2
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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602..1471
DNA (870bp) protein (290aa)
DegV family protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AU96_HERA2
degV family protein
DegV family protein {ECO:0000313|EMBL:ABX03015.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_expt_500_p_scaffold_3856_3
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1486..2025
DNA (540bp) protein (180aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2'-5' RNA ligase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z571_DESAT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
SCNpilot_expt_500_p_scaffold_3856_4
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2054..2473
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00036C2F54
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16243.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_expt_500_p_scaffold_3856_5
unknown

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2470..3198
DNA (729bp) protein (243aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3856_6
Listeria grandensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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3238..3663
DNA (426bp) protein (142aa)
protein hit n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B41673
HIT family protein {ECO:0000313|EMBL:EUJ22912.1}; TaxID=1265819 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria grandensis FSL F6-971.;"
hit; Hit-like protein involved in cell-cycle regulation; K02503 Hit-like protein involved in cell-cycle regulation
SCNpilot_expt_500_p_scaffold_3856_7
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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3958..5256
DNA (1299bp) protein (433aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] rbh
Enolase n=1 Tax=Caloramator australicus RC3 RepID=I7K604_9CLOT rbh
SCNpilot_expt_500_p_scaffold_3856_8
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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5410..6477
DNA (1068bp) protein (356aa)
rrs:RoseRS_3190 histone deacetylase superfamily protein id=1242617 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
histone deacetylase family protein rbh
Tax=CG_Anaero_02
SCNpilot_expt_500_p_scaffold_3856_9
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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6543..7718
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXJ5_THERP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM04982.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_expt_500_p_scaffold_3856_10
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(7697..8722)
DNA (1026bp) protein (342aa)
Glycosyl transferase group 1 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6I3_HERA2 rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:ABX02886.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Displaying 10 items

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