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This organism can only be binned in the context of its binning project CG_2015-01t. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

04302015_21_UNK

In projects: 04302015_21
Displaying items 51-100 of 29871 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
04302015_21_scaffold_6085 2 2605 bp 56.20 4.84 16.58
04302015_21_scaffold_34241 2 1069 bp 61.18 3.79 16.84
04302015_21_scaffold_23147
Species: Pseudomonas fluorescens (50%)
2 2298 bp 54.18 26.83 17.10
04302015_21_scaffold_16043
Species: R_Omnitrophica_44_11 (100%)
1 1613 bp 52.39 5.21 17.11
04302015_21_scaffold_33111 1 1089 bp 52.25 3.31 17.91
04302015_21_scaffold_1405
Phylum: Chlorophyta (50%)
6 7587 bp 50.77 13.96 17.99
04302015_21_scaffold_36700
Species: CG_Delta_02 (100%)
1 1028 bp 56.23 3.79 18.09
04302015_21_scaffold_25723
Species: Streptomyces filamentosus (50%)
2 1251 bp 55.08 7.79 18.47
04302015_21_scaffold_34421 1 1066 bp 69.89 3.94 18.57
04302015_21_scaffold_5743
Domain: Bacteria (50%)
4 5091 bp 49.28 18.44 18.76
04302015_21_scaffold_20765 1 1405 bp 51.46 17.30 18.79
04302015_21_scaffold_11587 3 1900 bp 56.32 24.08 18.95
04302015_21_scaffold_71636 1 1154 bp 57.02 4.16 18.98
04302015_21_scaffold_41086 3 1764 bp 52.95 47.87 19.22
04302015_21_scaffold_25600
Species: GWA2_Gallionellales_54_124_curated (100%)
1 1255 bp 52.51 3.11 19.60
04302015_21_scaffold_35041 1 1055 bp 59.72 4.55 19.62
04302015_21_scaffold_4597 4 2992 bp 55.01 15.54 19.85
04302015_21_scaffold_33129
Species: Rhodopseudomonas palustris (100%)
1 1088 bp 50.64 4.41 19.85
04302015_21_scaffold_35794
Species: Pseudomonas putida (100%)
1 1042 bp 50.48 4.46 20.15
04302015_21_scaffold_29426
Species: Curvibacter putative symbiont of Hydra magnipapillata (100%)
1 2337 bp 57.51 17.01 20.28
04302015_21_scaffold_8519 1 2210 bp 43.89 3.67 20.36
04302015_21_scaffold_33913 1 1075 bp 54.23 5.16 20.65
04302015_21_scaffold_1352 5 5557 bp 55.35 8.56 20.95
04302015_21_scaffold_32859
Species: Methanosarcina mazei (100%)
1 1094 bp 61.70 4.94 21.12
04302015_21_scaffold_38225 1 1004 bp 53.19 2.84 21.51
04302015_21_scaffold_30773 1 1134 bp 53.26 10.71 21.96
04302015_21_scaffold_33388 1 1083 bp 53.00 4.43 22.16
04302015_21_scaffold_13100 2 2923 bp 54.26 5.54 22.58
04302015_21_scaffold_9533
Species: Curvibacter putative symbiont of Hydra magnipapillata (100%)
1 2094 bp 52.34 6.59 22.64
04302015_21_scaffold_34764 1 1060 bp 53.87 4.53 22.64
04302015_21_scaffold_33551 2 1081 bp 52.82 4.16 23.03
04302015_21_scaffold_37524 2 1445 bp 49.13 4.78 23.04
04302015_21_scaffold_34337
Species: Methylomonas methanica (100%)
1 1067 bp 43.86 3.23 23.06
04302015_21_scaffold_30022
Species: GWC2_Nitrospirae_56_14_curated (50%)
2 1151 bp 63.34 3.39 23.20
04302015_21_scaffold_40856 2 1696 bp 60.73 47.49 23.35
04302015_21_scaffold_21513 2 2623 bp 50.59 9.49 23.45
04302015_21_scaffold_37896 1 1009 bp 61.55 3.57 23.49
04302015_21_scaffold_21299 2 1385 bp 50.90 2.82 23.61
04302015_21_scaffold_19481
Species: Curvibacter putative symbiont of Hydra magnipapillata (100%)
1 1453 bp 50.58 20.34 23.95
04302015_21_scaffold_55544
Species: Halomonas titanicae (50%)
2 1151 bp 57.86 24.11 23.98
04302015_21_scaffold_36984 1 1024 bp 48.93 4.54 24.02
04302015_21_scaffold_18695 2 1484 bp 61.86 4.04 24.06
04302015_21_scaffold_37852 1 1010 bp 62.08 7.57 24.06
04302015_21_scaffold_37563 1 1014 bp 58.97 2.96 24.26
04302015_21_scaffold_34442 1 1066 bp 57.60 14.49 24.48
04302015_21_scaffold_33682
Species: RIFOXYD1_FULL_OD1_44_32_curated (100%)
1 1078 bp 49.63 8.49 24.49
04302015_21_scaffold_33984 1 1073 bp 49.30 2.66 24.60
04302015_21_scaffold_4833 6 2921 bp 51.83 5.80 24.68
04302015_21_scaffold_50517 1 1310 bp 57.48 5.04 24.73
04302015_21_scaffold_22127
Species: mine drainage metagenome (100%)
1 1357 bp 63.67 3.87 24.76
Displaying items 51-100 of 29871 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.