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04302015_21_UNK

In projects: 04302015_21

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 6.99 Longest contig: 61.43 Kbp Bin length: 55.35 Mbp GC content: 62.88 %
Contigs count: 29871 Features count: 77800 rRNAs count: 23 tRNAs count: 272

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Displaying items 1-50 of 29871 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
04302015_21_scaffold_37895
Species: Cellulomonas cellasea (50%)
2 1009 bp 59.46 2.97 119.52
04302015_21_scaffold_36579 2 1030 bp 52.82 3.64 116.51
04302015_21_scaffold_26622
Species: Methylocystis sp. SC2 (50%)
2 1229 bp 62.25 5.00 115.95
04302015_21_scaffold_36967
Species: RIFOXYC2_FULL_PER-ii_58_32_curated (50%)
2 1024 bp 63.09 1.76 115.43
04302015_21_scaffold_25272
Species: Lysobacter arseniciresistens (50%)
2 1264 bp 66.93 7.71 115.35
04302015_21_scaffold_22947 3 1331 bp 60.41 3.16 114.27
04302015_21_scaffold_25951
Domain: Bacteria (66.67%)
3 1246 bp 57.95 3.37 114.13
04302015_21_scaffold_60091
Species: Pseudomonas aeruginosa (50%)
2 1124 bp 62.99 3.60 113.70
04302015_21_scaffold_18894
Genus: Mycobacterium (66.67%)
3 1476 bp 70.60 3.66 113.01
04302015_21_scaffold_27691
Species: Acidocella sp. MX-AZ02 (50%)
2 1202 bp 67.39 4.12 111.81
04302015_21_scaffold_33440
Species: RLO_RIF02_62_27 (50%)
2 1083 bp 61.40 2.22 111.63
04302015_21_scaffold_29365
Species: Afipia sp. P52-10 (50%)
2 1164 bp 66.58 4.25 111.60
04302015_21_scaffold_33188 3 1087 bp 60.90 2.48 111.50
04302015_21_scaffold_37815 2 1010 bp 63.76 2.67 111.39
04302015_21_scaffold_75911
Species: Thermoanaerobaculum aquaticum (50%)
2 1152 bp 69.79 8.59 111.20
04302015_21_scaffold_29795 3 1155 bp 65.63 2.60 111.17
04302015_21_scaffold_34851
Species: Hyphomonas johnsonii (50%)
2 1059 bp 66.38 2.27 111.05
04302015_21_scaffold_17250
Species: R_RIF_OD1_11_50_13 (50%)
2 1552 bp 61.34 5.32 110.95
04302015_21_scaffold_35351
Species: Sideroxydans lithotrophicus (50%)
2 1050 bp 73.14 3.57 110.86
04302015_21_scaffold_19311
Species: mine drainage metagenome (66.67%)
3 1460 bp 67.33 4.93 110.34
04302015_21_scaffold_18495
Species: Mizugakiibacter sediminis (50%)
2 1494 bp 71.15 3.61 110.24
04302015_21_scaffold_37925 3 1008 bp 65.77 2.98 110.12
04302015_21_scaffold_32405
Species: Nitrobacter hamburgensis (50%)
2 1102 bp 71.87 3.68 109.98
04302015_21_scaffold_22238
Species: RBG_16_Actinobacteria_68_12_curated (50%)
2 1354 bp 64.11 3.32 109.90
04302015_21_scaffold_15752
Species: RBG_16_Chloroflexi_54_11_curated (50%)
2 1628 bp 73.28 4.61 109.64
04302015_21_scaffold_25423
Species: mine drainage metagenome (50%)
2 1259 bp 56.63 2.86 109.61
04302015_21_scaffold_18888
Genus: Nitrosospira (66.67%)
3 1477 bp 55.45 2.95 109.48
04302015_21_scaffold_18724 3 1483 bp 56.51 2.73 109.44
04302015_21_scaffold_33919
Domain: Bacteria (66.67%)
3 1075 bp 49.95 2.79 109.40
04302015_21_scaffold_34318 3 1067 bp 58.76 4.78 109.37
04302015_21_scaffold_24633
Genus: Acidithiobacillus (66.67%)
3 1282 bp 61.78 4.56 109.28
04302015_21_scaffold_36797
Species: RLO_Betaproteobacteria_65_14 (50%)
2 1027 bp 63.58 3.80 109.25
04302015_21_scaffold_18722
Species: mine drainage metagenome (50%)
2 1483 bp 62.04 3.84 109.24
04302015_21_scaffold_28414
Species: Synechococcus sp. JA-2-3B'a(2-13) (50%)
2 1582 bp 44.37 3.22 109.23
04302015_21_scaffold_20576
Species: Sulfuricella denitrificans (50%)
2 1412 bp 56.16 3.61 108.99
04302015_21_scaffold_33749 2 1077 bp 61.00 3.34 108.91
04302015_21_scaffold_10726 2 1975 bp 42.94 3.27 108.91
04302015_21_scaffold_30942
Species: BJP_IG2102_Ignavibacteriales_35_8 (50%)
2 1131 bp 62.33 3.98 108.75
04302015_21_scaffold_32898 3 1093 bp 73.56 3.16 108.69
04302015_21_scaffold_19447 3 1455 bp 64.47 3.61 108.25
04302015_21_scaffold_37206
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1020 bp 65.20 3.97 108.23
04302015_21_scaffold_15492 3 1642 bp 54.51 3.11 108.16
04302015_21_scaffold_84166
Species: mine drainage metagenome (75%)
4 1132 bp 71.55 9.94 108.13
04302015_21_scaffold_36417
Species: Brevibacillus panacihumi (50%)
2 1033 bp 55.57 6.68 108.04
04302015_21_scaffold_12104
Species: Chthoniobacter flavus (50%)
2 1859 bp 68.48 6.70 107.80
04302015_21_scaffold_31513
Domain: Bacteria (66.67%)
3 1119 bp 58.80 3.35 107.78
04302015_21_scaffold_35517
Species: GWA1_OD1_49_17_curated (50%)
2 1047 bp 51.67 5.16 107.74
04302015_21_scaffold_29619
Phylum: Proteobacteria (66.67%)
3 1159 bp 68.85 4.01 107.68
04302015_21_scaffold_11911
Species: RLO_Betaproteobacteria_68_20 (50%)
2 1874 bp 68.14 4.56 107.42
04302015_21_scaffold_9697 3 2076 bp 63.01 6.14 107.37
Displaying items 1-50 of 29871 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.