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04302015_21_UNK

In projects: 04302015_21
Displaying items 1-50 of 29871 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
04302015_21_scaffold_33701 0 1500 bp 56.80 16.20 0.00
04302015_21_scaffold_23322 0 1319 bp 51.55 9.55 0.00
04302015_21_scaffold_35253 0 1051 bp 51.47 37.39 0.00
04302015_21_scaffold_22207 0 1355 bp 55.06 7.75 0.00
04302015_21_scaffold_16119 0 1897 bp 51.50 234.77 0.00
04302015_21_scaffold_64757 0 1159 bp 51.34 12.30 0.00
04302015_21_scaffold_34153 0 1369 bp 49.67 13.26 0.00
04302015_21_scaffold_27205 1 1214 bp 52.97 6.80 0.00
04302015_21_scaffold_11369 1 1918 bp 45.93 6.26 3.81
04302015_21_scaffold_19166 1 1466 bp 56.68 8.39 4.91
04302015_21_scaffold_15560 1 1638 bp 59.10 4.67 5.49
04302015_21_scaffold_22410 1 1348 bp 53.49 7.34 5.79
04302015_21_scaffold_35154 2 1569 bp 51.18 15.49 5.93
04302015_21_scaffold_27695 1 1202 bp 45.34 12.73 6.24
04302015_21_scaffold_28659 1 1180 bp 59.41 6.23 6.61
04302015_21_scaffold_18437 1 1496 bp 52.14 21.56 6.62
04302015_21_scaffold_34166 1 1070 bp 48.04 11.64 7.01
04302015_21_scaffold_31895 1 1112 bp 49.82 3.24 7.55
04302015_21_scaffold_57406 1 1265 bp 50.04 5.10 7.83
04302015_21_scaffold_80332 1 1064 bp 58.36 21.29 7.89
04302015_21_scaffold_28112 2 1193 bp 52.89 9.30 8.05
04302015_21_scaffold_31391 2 1122 bp 56.24 5.08 8.29
04302015_21_scaffold_83902
Species: Xanthomonas arboricola (50%)
2 1586 bp 52.14 193.32 8.32
04302015_21_scaffold_30833 1 1133 bp 46.51 6.22 8.47
04302015_21_scaffold_14544 2 1697 bp 49.15 10.25 9.02
04302015_21_scaffold_21426 1 1381 bp 44.03 3.48 9.12
04302015_21_scaffold_53452
Species: Rhizophagus irregularis (100%)
1 1282 bp 48.99 7.37 9.13
04302015_21_scaffold_35439
Species: RBG_19FT_COMBO_Nitrospirae_55_12_curated (100%)
1 1049 bp 59.39 3.15 10.58
04302015_21_scaffold_24375 1 1288 bp 68.94 2.56 11.18
04302015_21_scaffold_68193 2 1044 bp 55.84 74.28 11.21
04302015_21_scaffold_29470 2 1162 bp 54.56 5.94 11.36
04302015_21_scaffold_35247
Species: Bifidobacterium asteroides (100%)
1 1051 bp 71.65 3.00 11.99
04302015_21_scaffold_52622 1 1041 bp 53.51 86.74 12.10
04302015_21_scaffold_9224 1 2128 bp 58.27 5.29 12.41
04302015_21_scaffold_5286
Species: uncultured gamma proteobacterium (50%)
2 2793 bp 52.74 7.20 12.50
04302015_21_scaffold_23854
Species: uncultured delta proteobacterium HF4000_08N17 (100%)
1 1303 bp 47.05 5.99 12.66
04302015_21_scaffold_6538
Species: R_SM2F11_43_23 (50%)
2 2517 bp 47.04 7.99 13.35
04302015_21_scaffold_54557
Species: Parasutterella excrementihominis (100%)
1 1255 bp 52.75 11.59 13.39
04302015_21_scaffold_34597 1 1063 bp 57.67 38.95 13.55
04302015_21_scaffold_29787 1 1155 bp 56.54 3.12 13.77
04302015_21_scaffold_36903 1 1025 bp 52.68 1.76 14.34
04302015_21_scaffold_25260
Species: Pseudomonas fluorescens (100%)
1 1264 bp 56.17 11.39 15.19
04302015_21_scaffold_13150 1 1786 bp 58.29 3.86 15.29
04302015_21_scaffold_30723 1 1136 bp 71.04 4.62 15.32
04302015_21_scaffold_14623
Species: uncultured Chloroflexi bacterium HF0200_09I09 (50%)
2 1692 bp 50.59 9.49 15.60
04302015_21_scaffold_14272 1 1714 bp 53.50 5.43 16.10
04302015_21_scaffold_31040 1 1129 bp 41.01 2.66 16.21
04302015_21_scaffold_59117
Species: [Clostridium] leptum (100%)
1 1339 bp 52.13 54.33 16.36
04302015_21_scaffold_16086
Species: CG_Magasa_02 (100%)
1 1611 bp 50.22 5.77 16.39
04302015_21_scaffold_36935 1 1024 bp 48.73 2.64 16.41
Displaying items 1-50 of 29871 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.