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scnpilot_expt_750_p_scaffold_1474_curated_3

Organism: scnpilot_dereplicated_Accumulibacter_1

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 2887..4605

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.6
  • Coverage: 588.0
  • Bit_score: 205
  • Evalue 2.10e-49
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 588.0
  • Bit_score: 200
  • Evalue 2.00e-48
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 588.0
  • Bit_score: 200
  • Evalue 2.00e-48

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Taxonomy

Pseudomonas sp. 12M76_air → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
ATGCGGCAACTTGTCATCGTCGAGAGTCCGCACAAAGCGGAAGCGATTGAGGCGTTATATCCCGGCACGGCGTGCGTCGCCACCGTGGGGCATATCTGTGATCTCTCCCCTACCCCAATGAATGGTGTCGGCGTTGATCGAAATACCTTGCAGGGCGAGTACGTCTTGACCAGCAACCCCAATCGAAGCACGGACGGGGTACGGTTTGTATCAGAAATTCGGCGCCGATTGGAAGAACACCCGGACATCCTGGTGACGCTGGCAACTAACCCGGACCCCGAGGGAGAATCTACCGCGGCGTTTCTCGTCAAGCATTTGGGTTTGCGTGAGTACCGGCGCGTTTTGCCTCACGCCATCACCAAAGACGCGTTTGACAGGGCATGGGGGCGATCGGACGCGATCAACTGGGCCAAGGTCAATGAGCACGAAGCTCGACGAGTTATCAACCGCTTGGTGGGCTCCACAATCGATTCGTTCCTGGGAACGTCGTCTGATAAGCAGCCATCGCCGTTCTATCCTCTGCAGGTGGCCGTCGAAGCACTTATCGTGGAACGTGAACGGGCCATCCGAACGTTTTCCGCAAAGCCGTTCTACACGACACGATATGGATTCGACGGGTGGCAGGCCCAATGGGAACCATCGATACCTAGGCCGATTGTGAATGGCCCCACGCCGAATCAGTTCTACGACGCCGAGGACCTTAACCCGCGCTGCCACAGCCGCGCCTCGGCCGAGCATGCCGCCGGCTTTCCTTCGCTTCTGGTTCTCAACCATTTCGAACGCATCGAAGAGGTAGCGCCGCCACCGCCGCTAAACACGCCGGCGATGCTGCGGGCAGCTGCTCGGCAGCTAAGTTGGGGTGTTGGCAAAACCATTCAGGTTGCGCAGCAGCTTTTTGACGGCAGCCGGGCCGGCCCAGGCCTCATCACCTATCACCGCGGTAGCGGCCGAAGCGTCGGCCGAAGCGTTGCGATGACAATTCGCGCCCGGCTTGCCGAAGAGCGGTTACCCGTTTCTGACGGGCCCAGCTATCTGTCCGAACAGATAGGATGTGGAGGAATCGTCCCGACCCGTATTGAACTGGAACAGGCAGGTGCCGATAGCGATCAGCAAGCGCTCTATCGAATCATTTGGGAGCGGGCGATGTTCAGCCAACTGAGGGCCGCCCGCTTCGCGCTGAAACGAGTTGAATTGGTTGATCCGGGTAGAGGCCAACAGAAGTTTTCCGCAACATCAAGAACAATGATCGAGGCGGGCTGGCTGGGAACTGCCGCAAAAATTTACGCCTGGGATACCGCCTATGGAAACGTGCCGGCCCACTTAGGCACAGGCCCAACGCTCCCGCTCCTTTCCGTAGGTCCTATCCTTCGCCGCCAAACGTGCGCGGTAGAGGAATGCGCAGCGCCGGCGCCGCTTCGCTATACCGTCGATAGCTTGATTTCCGCATTGGATCGCCATGGACTTGCTCACCCTTTCCTTCTCCCCGGGATCTTTCGGCGATTGGAATGCGACGGGTTTGTTGAGAGAGATGGCCTCTTTCATGCGACGGAGATCGCGGAGAAGCGCTACGATGCTTTGTACCCGCGCTTTGCTTTTGCCCACATCAACTATGCCATCGAACTCGAACAAGCACTGCGCTTGGTCTTGAGGCAGCAACTGGACGGCATACAGCTGACGCGCAAGGTGTGGGAACGACTGGATTCGGATTGCAGCGCCTAG
PROTEIN sequence
Length: 573
MRQLVIVESPHKAEAIEALYPGTACVATVGHICDLSPTPMNGVGVDRNTLQGEYVLTSNPNRSTDGVRFVSEIRRRLEEHPDILVTLATNPDPEGESTAAFLVKHLGLREYRRVLPHAITKDAFDRAWGRSDAINWAKVNEHEARRVINRLVGSTIDSFLGTSSDKQPSPFYPLQVAVEALIVERERAIRTFSAKPFYTTRYGFDGWQAQWEPSIPRPIVNGPTPNQFYDAEDLNPRCHSRASAEHAAGFPSLLVLNHFERIEEVAPPPPLNTPAMLRAAARQLSWGVGKTIQVAQQLFDGSRAGPGLITYHRGSGRSVGRSVAMTIRARLAEERLPVSDGPSYLSEQIGCGGIVPTRIELEQAGADSDQQALYRIIWERAMFSQLRAARFALKRVELVDPGRGQQKFSATSRTMIEAGWLGTAAKIYAWDTAYGNVPAHLGTGPTLPLLSVGPILRRQTCAVEECAAPAPLRYTVDSLISALDRHGLAHPFLLPGIFRRLECDGFVERDGLFHATEIAEKRYDALYPRFAFAHINYAIELEQALRLVLRQQLDGIQLTRKVWERLDSDCSA*