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SCNpilot_expt_1000_bf_scaffold_1602_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1602_curated_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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179..679
DNA (501bp) protein (167aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T586_ACIDE
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
molybdenum cofactor biosynthesis protein C
SCNpilot_expt_1000_bf_scaffold_1602_curated_2
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(816..1859)
DNA (1044bp) protein (348aa)
O-antigen polymerase family protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XJE1_VARPD
O-antigen polymerase family protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCNpilot_expt_1000_bf_scaffold_1602_curated_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2598..3098)
DNA (501bp) protein (167aa)
Protein involved in methylation n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYT5_VARPE
methylation protein; K02650 type IV pilus assembly protein PilA
Protein involved in methylation {ECO:0000313|EMBL:ADU40060.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_expt_1000_bf_scaffold_1602_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3418..3573)
DNA (156bp) protein (52aa)
3',5'-cyclic-nucleotide phosphodiesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IG39_9BURK
3',5'-cyclic-nucleotide phosphodiesterase
3',5'-cyclic-nucleotide phosphodiesterase {ECO:0000313|EMBL:AFU48346.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1602_curated_5
unknown

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4872..5012
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1602_curated_6
unknown

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5121..5336
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1602_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6586..7227)
DNA (642bp) protein (214aa)
FHA domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYU2_9BURK
FHA domain-containing protein
FHA domain-containing protein {ECO:0000313|EMBL:AFU48348.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1602_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8021..10654)
DNA (2634bp) protein (878aa)
Serine/threonine protein kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6U6_9BURK
Serine/threonine protein kinase {ECO:0000313|EMBL:AFU48350.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
serine/threonine protein kinase
SCNpilot_expt_1000_bf_scaffold_1602_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10924..11610)
DNA (687bp) protein (229aa)
YjbE family integral membrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IG45_9BURK
YjbE family integral membrane protein
YjbE family integral membrane protein {ECO:0000313|EMBL:AFU48351.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1602_curated_10
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11755..12651)
DNA (897bp) protein (299aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUQ3_9BURK
SCNpilot_expt_1000_bf_scaffold_1602_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12667..13827)
DNA (1161bp) protein (387aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYU7_9BURK
SCNpilot_expt_1000_bf_scaffold_1602_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14032..14964
DNA (933bp) protein (311aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAL4_9BURK
SCNpilot_expt_1000_bf_scaffold_1602_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15018..15476)
DNA (459bp) protein (153aa)
Regulatory protein RecX n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6V1_9BURK
regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1602_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15561..16637)
DNA (1077bp) protein (359aa)
Protein RecA n=1 Tax=Acidovorax sp. KKS102 RepID=K0IG51_9BURK
recombination protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1602_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16778..17299
DNA (522bp) protein (174aa)
MarR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I562_9BURK
marR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AFU48357.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1602_curated_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17272..18219)
DNA (948bp) protein (316aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYV0_9BURK
LysR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1602_curated_17
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18327..19292
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAL8_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1602_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19458..20390
DNA (933bp) protein (311aa)
N-formylglutamate amidohydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6V6_9BURK
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:AFU48360.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1602_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20518..21192
DNA (675bp) protein (225aa)
Two component transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0IG56_9BURK
two component transcriptional regulator
Two component transcriptional regulator {ECO:0000313|EMBL:AFU48361.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 19 items

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