ggKbase home page

SCNpilot_expt_1000_bf_scaffold_23545_curated_9

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: comp(5057..5311)

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel protein MscS n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037484BD similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 78.0
  • Bit_score: 136
  • Evalue 1.30e-29
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:GAD23385.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 78.0
  • Bit_score: 136
  • Evalue 1.80e-29
mechanosensitive ion channel protein MscS; K16053 miniconductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 77.0
  • Bit_score: 135
  • Evalue 8.80e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
GTGCGCGCGCATCCCGGCATCCACCCGGACATGCTGCTGATCGTGCGCGCGCTGGAGCCCACGGGCGAGGGGGTGCCGCTGGAGCTGTACTGCTTCACCGCCACCACGGCCTGGGTGGAGTACGAGCGCATCCAGGGCGACATCTTCGACCACCTGATCGCCATCCTGCCCGAGTTCGGCCTGGGCCTGTACCAGAGCCCCACGGGCAAGGACATCCGTGCGGCATGGCGGCAGGATTCAGTTCAAAAACAATAG
PROTEIN sequence
Length: 85
VRAHPGIHPDMLLIVRALEPTGEGVPLELYCFTATTAWVEYERIQGDIFDHLIAILPEFGLGLYQSPTGKDIRAAWRQDSVQKQ*